| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is rpmG
Identifier: 124025719
GI number: 124025719
Start: 939520
End: 939717
Strand: Direct
Name: rpmG
Synonym: NATL1_10121
Alternate gene names: 124025719
Gene position: 939520-939717 (Clockwise)
Preceding gene: 124025717
Following gene: 124025720
Centisome position: 50.38
GC content: 35.35
Gene sequence:
>198_bases ATGGCGAAAAAAGGTACCAGAATTGTGGTTACTTTAGAATGTACTGAGTCTAGATCTGTTCCTAGCTCAGAAAAGCGTTC TGCAGGAGTATCTAGATACACCACAGAGAAAAATCGTAGGAACACTACTGAGAGACTTGAACTTAAAAAATTCTGTCCTG AATTAAATAAGATGACAATTCATAGAGAAATCAAATAA
Upstream 100 bases:
>100_bases AGTTATACATAGGTGCTCAAATGAATTTATAAAAAAGGGTGCTTAGCCTAGTAAGATTGTACTTTGTTCCCTAGACTCAC CAAAGTTGAGCTAAGTTCAT
Downstream 100 bases:
>100_bases TTATTCTAAACACACTTTTAAAAAATGACTAATTCACTATTTAAACAAAAGCTTTCTCCAATAAAGCCAGGCGATCCTAT TGATTATAAGGACGTTGAAT
Product: 50S ribosomal protein L33
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MAKKGTRIVVTLECTESRSVPSSEKRSAGVSRYTTEKNRRNTTERLELKKFCPELNKMTIHREIK
Sequences:
>Translated_65_residues MAKKGTRIVVTLECTESRSVPSSEKRSAGVSRYTTEKNRRNTTERLELKKFCPELNKMTIHREIK >Mature_64_residues AKKGTRIVVTLECTESRSVPSSEKRSAGVSRYTTEKNRRNTTERLELKKFCPELNKMTIHREIK
Specific function: Unknown
COG id: COG0267
COG function: function code J; Ribosomal protein L33
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L33P family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL33_PROM1 (A2C260)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001014835.1 - ProteinModelPortal: A2C260 - SMR: A2C260 - STRING: A2C260 - GeneID: 4781246 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_10121 - eggNOG: COG0267 - HOGENOM: HBG751058 - OMA: RIVITLE - ProtClustDB: PRK00595 - BioCyc: PMAR167555:NATL1_10121-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00294 - InterPro: IPR001705 - InterPro: IPR018264 - InterPro: IPR011332 - TIGRFAMs: TIGR01023
Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd
EC number: NA
Molecular weight: Translated: 7555; Mature: 7424
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: PS00582 RIBOSOMAL_L33
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKGTRIVVTLECTESRSVPSSEKRSAGVSRYTTEKNRRNTTERLELKKFCPELNKMTI CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE HREIK EEECC >Mature Secondary Structure AKKGTRIVVTLECTESRSVPSSEKRSAGVSRYTTEKNRRNTTERLELKKFCPELNKMTI CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE HREIK EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA