Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is rpmG

Identifier: 124025719

GI number: 124025719

Start: 939520

End: 939717

Strand: Direct

Name: rpmG

Synonym: NATL1_10121

Alternate gene names: 124025719

Gene position: 939520-939717 (Clockwise)

Preceding gene: 124025717

Following gene: 124025720

Centisome position: 50.38

GC content: 35.35

Gene sequence:

>198_bases
ATGGCGAAAAAAGGTACCAGAATTGTGGTTACTTTAGAATGTACTGAGTCTAGATCTGTTCCTAGCTCAGAAAAGCGTTC
TGCAGGAGTATCTAGATACACCACAGAGAAAAATCGTAGGAACACTACTGAGAGACTTGAACTTAAAAAATTCTGTCCTG
AATTAAATAAGATGACAATTCATAGAGAAATCAAATAA

Upstream 100 bases:

>100_bases
AGTTATACATAGGTGCTCAAATGAATTTATAAAAAAGGGTGCTTAGCCTAGTAAGATTGTACTTTGTTCCCTAGACTCAC
CAAAGTTGAGCTAAGTTCAT

Downstream 100 bases:

>100_bases
TTATTCTAAACACACTTTTAAAAAATGACTAATTCACTATTTAAACAAAAGCTTTCTCCAATAAAGCCAGGCGATCCTAT
TGATTATAAGGACGTTGAAT

Product: 50S ribosomal protein L33

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MAKKGTRIVVTLECTESRSVPSSEKRSAGVSRYTTEKNRRNTTERLELKKFCPELNKMTIHREIK

Sequences:

>Translated_65_residues
MAKKGTRIVVTLECTESRSVPSSEKRSAGVSRYTTEKNRRNTTERLELKKFCPELNKMTIHREIK
>Mature_64_residues
AKKGTRIVVTLECTESRSVPSSEKRSAGVSRYTTEKNRRNTTERLELKKFCPELNKMTIHREIK

Specific function: Unknown

COG id: COG0267

COG function: function code J; Ribosomal protein L33

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L33P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL33_PROM1 (A2C260)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001014835.1
- ProteinModelPortal:   A2C260
- SMR:   A2C260
- STRING:   A2C260
- GeneID:   4781246
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_10121
- eggNOG:   COG0267
- HOGENOM:   HBG751058
- OMA:   RIVITLE
- ProtClustDB:   PRK00595
- BioCyc:   PMAR167555:NATL1_10121-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00294
- InterPro:   IPR001705
- InterPro:   IPR018264
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01023

Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7555; Mature: 7424

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: PS00582 RIBOSOMAL_L33

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKGTRIVVTLECTESRSVPSSEKRSAGVSRYTTEKNRRNTTERLELKKFCPELNKMTI
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE
HREIK
EEECC
>Mature Secondary Structure 
AKKGTRIVVTLECTESRSVPSSEKRSAGVSRYTTEKNRRNTTERLELKKFCPELNKMTI
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE
HREIK
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA