| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025663
Identifier: 124025663
GI number: 124025663
Start: 879852
End: 881501
Strand: Direct
Name: 124025663
Synonym: NATL1_09561
Alternate gene names: NA
Gene position: 879852-881501 (Clockwise)
Preceding gene: 124025661
Following gene: 124025664
Centisome position: 47.18
GC content: 27.21
Gene sequence:
>1650_bases ATGCAAATTCCTTTATCTAATGTTATTAACTATATGAAGATTAAAGCAGTAGTTTTAAATTTTTTCTTAAAGAACAAAAA AAATATTTTACCATTCTTTGCCGTTCTTCTTTTTATATCACTTTATTTCCTTATCGATTTTTCTAGTCAAAGTCTTGTCG CTCATGACGAGGGACTTTACGCGAGAAGAGCAAGATTGATTGAGTCCTCTGCTAATTGGTTTTCCCCCCCATTCATATCC CCTCACCATAAGACATTAGGAAGTTATTGGTTTATAGCATTATCTATAAGGTTGTTTGGAAACAGTGAACTAGCTCTAAG GCTTCCAAGTATTCTTTCTTCTTTCCTTTGCTTAATAACCTCATACTTAATAGCATTAAAAACAACAAATAGTAAGTCTG CATTGATTTCTTTGTTCTCACTTTCATCAATGCCATTATGGATTCAATATTCAAGATATGCGAGTCCAGACTTACCATTT GTACTTTGTACTCTATTAGCTATATTATTTTTCCTTAAATCCCTAGATTCTTCAAAATATATAAGTCAGTATTTTAATTT ATTTTGCTCTGGCCTTTTTATTTCTTCTTCTTTTTTTATTAGAAGTTATATGGCCTTTGTTCCTTTTATAGGACTAGCAC CTTTTATTTATTATCATTTATTTAGAAAAGAATTTATTTTTAAACTTTTCTTTTGTACTGGAATAGCTGTTGGATTTATA CCTACGTTTTTTAATCTGTATTTTTCAGTACAAAAGTTTGGCATCTCCGGAATTACAAGCCTTTTTGATTTTGCAAAGAA ACAGGCTCTCGGTGAATTTGCTTTTAATAATTTATTACTCGTACCTGTTAATTTTCTTTATTTAACATTTCCTATTGGAA TATTACTTCTTATTCTTTTTTTATTCACTGGATCCAATAATAAGGCTAACTATCCATTATTGATTTATTGTTATCCTCTT TCATCTTTAATCTTACTATTATGCATGTCTACATCATATCCACATTATTATCTTTTTCTCTTACCTTCTTTATCTATAAT CTTTGCAAACTACCTAACATCTAATTCACCTAGATATTCATTTTCAAGCTCTATTATTAGATATTTAGTCTTTATTGTAC TTTTAATAATATCATCTGTTATATTATTTTCAATTCTTAGATTTTCAGACCAAGTACTTCTTTATTCAAGAGGAACTCCC GTAATAGTATATATTCTTATCTCATTAATTGTGTTATCCTATATTACTTCACTTAGATTTCTATTTGATTTTAAATATCC AAATTCTAATATAATTAATTTCTTTTATAATATAATCATACCGCAATATATTTCTTTATCATTATTGTTTAATTTTGGTG TCCTAGGTAATCCCAATCATAATACGAAAGTTTTCCTGAAGGATGCTGATGTTTCATCAATTATAAACTCTAATACTATT TACCTATTTAGTGTTGAAAGTAAGATTCAGACTTTACTATCTTATTATTTACCTTCCTCTGTGATAGTAGATGATTTTGA ATTAATTAGTAAATATAAGTATGTAATTACTTCTAATGCTAATTCATTAGAGAAATTAAAATTAAAACAAATCTTTGTTC CTGTTAAAAAATTTGACAATCACTTATTATTAATGAATATTGACTCATAG
Upstream 100 bases:
>100_bases TCATACTTTTTAGATTCCCAAATCAAATTACTAAGTATATAATCTGATTTAAGTGTAGTTCATTAAAAATGAACTTTTGA GTTTCTAGTCATACTCGAAT
Downstream 100 bases:
>100_bases TATTATATTAATTATTTTGAACCATATAATAAAATGAATCAGATGCTTAAAAATGCCTACGCGAAATTTTGGGTTCCGGT TATGGGCAGGTTTATTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Dolichyl-Phosphate-Mannose-Proteinmannosyltransferase; Glycosyl Transferase Family Protein; Family; Glycosyltransferase
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MQIPLSNVINYMKIKAVVLNFFLKNKKNILPFFAVLLFISLYFLIDFSSQSLVAHDEGLYARRARLIESSANWFSPPFIS PHHKTLGSYWFIALSIRLFGNSELALRLPSILSSFLCLITSYLIALKTTNSKSALISLFSLSSMPLWIQYSRYASPDLPF VLCTLLAILFFLKSLDSSKYISQYFNLFCSGLFISSSFFIRSYMAFVPFIGLAPFIYYHLFRKEFIFKLFFCTGIAVGFI PTFFNLYFSVQKFGISGITSLFDFAKKQALGEFAFNNLLLVPVNFLYLTFPIGILLLILFLFTGSNNKANYPLLIYCYPL SSLILLLCMSTSYPHYYLFLLPSLSIIFANYLTSNSPRYSFSSSIIRYLVFIVLLIISSVILFSILRFSDQVLLYSRGTP VIVYILISLIVLSYITSLRFLFDFKYPNSNIINFFYNIIIPQYISLSLLFNFGVLGNPNHNTKVFLKDADVSSIINSNTI YLFSVESKIQTLLSYYLPSSVIVDDFELISKYKYVITSNANSLEKLKLKQIFVPVKKFDNHLLLMNIDS
Sequences:
>Translated_549_residues MQIPLSNVINYMKIKAVVLNFFLKNKKNILPFFAVLLFISLYFLIDFSSQSLVAHDEGLYARRARLIESSANWFSPPFIS PHHKTLGSYWFIALSIRLFGNSELALRLPSILSSFLCLITSYLIALKTTNSKSALISLFSLSSMPLWIQYSRYASPDLPF VLCTLLAILFFLKSLDSSKYISQYFNLFCSGLFISSSFFIRSYMAFVPFIGLAPFIYYHLFRKEFIFKLFFCTGIAVGFI PTFFNLYFSVQKFGISGITSLFDFAKKQALGEFAFNNLLLVPVNFLYLTFPIGILLLILFLFTGSNNKANYPLLIYCYPL SSLILLLCMSTSYPHYYLFLLPSLSIIFANYLTSNSPRYSFSSSIIRYLVFIVLLIISSVILFSILRFSDQVLLYSRGTP VIVYILISLIVLSYITSLRFLFDFKYPNSNIINFFYNIIIPQYISLSLLFNFGVLGNPNHNTKVFLKDADVSSIINSNTI YLFSVESKIQTLLSYYLPSSVIVDDFELISKYKYVITSNANSLEKLKLKQIFVPVKKFDNHLLLMNIDS >Mature_549_residues MQIPLSNVINYMKIKAVVLNFFLKNKKNILPFFAVLLFISLYFLIDFSSQSLVAHDEGLYARRARLIESSANWFSPPFIS PHHKTLGSYWFIALSIRLFGNSELALRLPSILSSFLCLITSYLIALKTTNSKSALISLFSLSSMPLWIQYSRYASPDLPF VLCTLLAILFFLKSLDSSKYISQYFNLFCSGLFISSSFFIRSYMAFVPFIGLAPFIYYHLFRKEFIFKLFFCTGIAVGFI PTFFNLYFSVQKFGISGITSLFDFAKKQALGEFAFNNLLLVPVNFLYLTFPIGILLLILFLFTGSNNKANYPLLIYCYPL SSLILLLCMSTSYPHYYLFLLPSLSIIFANYLTSNSPRYSFSSSIIRYLVFIVLLIISSVILFSILRFSDQVLLYSRGTP VIVYILISLIVLSYITSLRFLFDFKYPNSNIINFFYNIIIPQYISLSLLFNFGVLGNPNHNTKVFLKDADVSSIINSNTI YLFSVESKIQTLLSYYLPSSVIVDDFELISKYKYVITSNANSLEKLKLKQIFVPVKKFDNHLLLMNIDS
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62975; Mature: 62975
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIPLSNVINYMKIKAVVLNFFLKNKKNILPFFAVLLFISLYFLIDFSSQSLVAHDEGLY CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH ARRARLIESSANWFSPPFISPHHKTLGSYWFIALSIRLFGNSELALRLPSILSSFLCLIT HHHHHHHHCCCCCCCCCCCCCCHHHHHHHEEEEEEEEEECCCCCEEEHHHHHHHHHHHHH SYLIALKTTNSKSALISLFSLSSMPLWIQYSRYASPDLPFVLCTLLAILFFLKSLDSSKY HHHHHEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHH ISQYFNLFCSGLFISSSFFIRSYMAFVPFIGLAPFIYYHLFRKEFIFKLFFCTGIAVGFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTFFNLYFSVQKFGISGITSLFDFAKKQALGEFAFNNLLLVPVNFLYLTFPIGILLLILF HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHH LFTGSNNKANYPLLIYCYPLSSLILLLCMSTSYPHYYLFLLPSLSIIFANYLTSNSPRYS HHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCC FSSSIIRYLVFIVLLIISSVILFSILRFSDQVLLYSRGTPVIVYILISLIVLSYITSLRF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH LFDFKYPNSNIINFFYNIIIPQYISLSLLFNFGVLGNPNHNTKVFLKDADVSSIINSNTI HHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCCCEE YLFSVESKIQTLLSYYLPSSVIVDDFELISKYKYVITSNANSLEKLKLKQIFVPVKKFDN EEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCC HLLLMNIDS EEEEEEECC >Mature Secondary Structure MQIPLSNVINYMKIKAVVLNFFLKNKKNILPFFAVLLFISLYFLIDFSSQSLVAHDEGLY CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH ARRARLIESSANWFSPPFISPHHKTLGSYWFIALSIRLFGNSELALRLPSILSSFLCLIT HHHHHHHHCCCCCCCCCCCCCCHHHHHHHEEEEEEEEEECCCCCEEEHHHHHHHHHHHHH SYLIALKTTNSKSALISLFSLSSMPLWIQYSRYASPDLPFVLCTLLAILFFLKSLDSSKY HHHHHEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHH ISQYFNLFCSGLFISSSFFIRSYMAFVPFIGLAPFIYYHLFRKEFIFKLFFCTGIAVGFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTFFNLYFSVQKFGISGITSLFDFAKKQALGEFAFNNLLLVPVNFLYLTFPIGILLLILF HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHH LFTGSNNKANYPLLIYCYPLSSLILLLCMSTSYPHYYLFLLPSLSIIFANYLTSNSPRYS HHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCC FSSSIIRYLVFIVLLIISSVILFSILRFSDQVLLYSRGTPVIVYILISLIVLSYITSLRF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH LFDFKYPNSNIINFFYNIIIPQYISLSLLFNFGVLGNPNHNTKVFLKDADVSSIINSNTI HHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCCCEE YLFSVESKIQTLLSYYLPSSVIVDDFELISKYKYVITSNANSLEKLKLKQIFVPVKKFDN EEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCC HLLLMNIDS EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA