| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025624
Identifier: 124025624
GI number: 124025624
Start: 848900
End: 849277
Strand: Direct
Name: 124025624
Synonym: NATL1_09171
Alternate gene names: NA
Gene position: 848900-849277 (Clockwise)
Preceding gene: 124025623
Following gene: 124025625
Centisome position: 45.52
GC content: 31.22
Gene sequence:
>378_bases ATGGCTTCATATGTATATTTGATTCAGAATGGTGATTTATTCAATATTGGTTTTACAGACAACCTTGAACGAACAAGAAT TAATTTAAGACCTGGAGAATTGGTAGCATTTCTAAATACTGATAACCCTGAACCACTTATTAAAAATATCAGGAAAATGT ATGTTGATAACAGATTACCTGGATCAGATTATTATCGACTTGCGAATTCACAAGTTAAAGAATGTAGAACTCTTCTAGAA GGAGATGGGTCGAATAATTATTTTCAGCCTTTTCTCAAGGGTCCAAGTTTATTTGTATTCTTTATTTTTTCTTGGGTTTT ATTGACTTATTTTATTATTGAGTTTGCTGTAGATCCTGTTCTAAGTCGCTTTACCTAA
Upstream 100 bases:
>100_bases CATTCGTCTTATTAATTATTTTATCTTTTGTTAAACTTTTATCTTTTTTTCTATTTACACTCTATCATTATTAAATATTA ATCTTTCAACTGCCTATAAA
Downstream 100 bases:
>100_bases TACTTACTGTTCTTTGATTCAATATATTAATGATTTATACATAATCTTGCCTACATAGATTTAATTTCATTGTTAGATTA TGTCCATATTATAAATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MASYVYLIQNGDLFNIGFTDNLERTRINLRPGELVAFLNTDNPEPLIKNIRKMYVDNRLPGSDYYRLANSQVKECRTLLE GDGSNNYFQPFLKGPSLFVFFIFSWVLLTYFIIEFAVDPVLSRFT
Sequences:
>Translated_125_residues MASYVYLIQNGDLFNIGFTDNLERTRINLRPGELVAFLNTDNPEPLIKNIRKMYVDNRLPGSDYYRLANSQVKECRTLLE GDGSNNYFQPFLKGPSLFVFFIFSWVLLTYFIIEFAVDPVLSRFT >Mature_124_residues ASYVYLIQNGDLFNIGFTDNLERTRINLRPGELVAFLNTDNPEPLIKNIRKMYVDNRLPGSDYYRLANSQVKECRTLLEG DGSNNYFQPFLKGPSLFVFFIFSWVLLTYFIIEFAVDPVLSRFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14549; Mature: 14418
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYVYLIQNGDLFNIGFTDNLERTRINLRPGELVAFLNTDNPEPLIKNIRKMYVDNRLP CCCEEEEEECCCEEECCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCC GSDYYRLANSQVKECRTLLEGDGSNNYFQPFLKGPSLFVFFIFSWVLLTYFIIEFAVDPV CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSRFT HHHCC >Mature Secondary Structure ASYVYLIQNGDLFNIGFTDNLERTRINLRPGELVAFLNTDNPEPLIKNIRKMYVDNRLP CCEEEEEECCCEEECCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCC GSDYYRLANSQVKECRTLLEGDGSNNYFQPFLKGPSLFVFFIFSWVLLTYFIIEFAVDPV CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSRFT HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA