Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is yedP [C]
Identifier: 124025622
GI number: 124025622
Start: 846969
End: 847769
Strand: Direct
Name: yedP [C]
Synonym: NATL1_09151
Alternate gene names: 124025622
Gene position: 846969-847769 (Clockwise)
Preceding gene: 124025621
Following gene: 124025623
Centisome position: 45.42
GC content: 31.71
Gene sequence:
>801_bases ATGAAAAATAATTCTAAATATTGGATAGTTACAGATCTTGATGGCACTTTAATGGACGAAGATTACGATATAACTCCTGC CAAAGAAACCTTAAAAATATTGGCAGAATTGAATATTCCTGTAATACCTTGTACTAGTAAAACTGCTTCTGAAGTTAGAT ATTTTAGAAAAGAGAATGCATTGACAGATCCTTTTATTGTCGAAAATGGAGCGGCTGTTTATGGGTGTTATGAACAAAAT TCGTCGGAATGGGAATTGATCTTAGGAAAAAGTTATTCTGAATTAAAAACTATATTATTTAATATCTCTAAAAAAGTTAA CTTCCACTTAACCCCATTAAATGATTTAAGCAAAAATCAAATATTTGAACTTACGGGATTATCTGATCAAGGTATTACTA GAGCTCTTGATAGGTGCTGGAGTGTTCCATTCTTAAATCCTCCTGATGAAATTTTTGAGAATGTAAAGTTTATTTGTGAT TTTTATAATGTGCATGTTTTTAAAGGAAATAGAATGAGTCATTTACTCTCCAGTGAAAGTCATAAAGGTAAAGCTGTTAA TAAATTAAAGGTTTATCTACAGAACAATGATGTAAAGATTATTGCACTTGGGGATTCGCAAAATGATCTTCCTTTACTTG AATATGCCGATATATCTATCGTTATTCCTGGCAAAAATGGCCCAAATAAGTACTTACAGAATGGTATTGATAATGGCTCT TTTAGATTAGCAAATGCCCCGCACGCAGAGGGGTGGGCAAATAGTGTTCAGGATATTATTAAAGATTTTATGGATTTATG A
Upstream 100 bases:
>100_bases AAACGTTTACTAGATAATATTTCAGGTTCTTATTTTAATACTGATACTTTTAAACTTAATCCTTATCAAGTCGTTTGGCT TACATTAGCTGATTAGTTTT
Downstream 100 bases:
>100_bases AAGATAAAGATATTAATAATGATTTTAATCATATTTTCCCAGAGGATATAAGGGACGATTTCCTTTTTTCTCTCGATAGT TATCGTCTATTTCTTGAAGG
Product: mannosyl-3-phosphoglycerate phosphatase
Products: NA
Alternate protein names: MPGP [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKNNSKYWIVTDLDGTLMDEDYDITPAKETLKILAELNIPVIPCTSKTASEVRYFRKENALTDPFIVENGAAVYGCYEQN SSEWELILGKSYSELKTILFNISKKVNFHLTPLNDLSKNQIFELTGLSDQGITRALDRCWSVPFLNPPDEIFENVKFICD FYNVHVFKGNRMSHLLSSESHKGKAVNKLKVYLQNNDVKIIALGDSQNDLPLLEYADISIVIPGKNGPNKYLQNGIDNGS FRLANAPHAEGWANSVQDIIKDFMDL
Sequences:
>Translated_266_residues MKNNSKYWIVTDLDGTLMDEDYDITPAKETLKILAELNIPVIPCTSKTASEVRYFRKENALTDPFIVENGAAVYGCYEQN SSEWELILGKSYSELKTILFNISKKVNFHLTPLNDLSKNQIFELTGLSDQGITRALDRCWSVPFLNPPDEIFENVKFICD FYNVHVFKGNRMSHLLSSESHKGKAVNKLKVYLQNNDVKIIALGDSQNDLPLLEYADISIVIPGKNGPNKYLQNGIDNGS FRLANAPHAEGWANSVQDIIKDFMDL >Mature_266_residues MKNNSKYWIVTDLDGTLMDEDYDITPAKETLKILAELNIPVIPCTSKTASEVRYFRKENALTDPFIVENGAAVYGCYEQN SSEWELILGKSYSELKTILFNISKKVNFHLTPLNDLSKNQIFELTGLSDQGITRALDRCWSVPFLNPPDEIFENVKFICD FYNVHVFKGNRMSHLLSSESHKGKAVNKLKVYLQNNDVKIIALGDSQNDLPLLEYADISIVIPGKNGPNKYLQNGIDNGS FRLANAPHAEGWANSVQDIIKDFMDL
Specific function: Unknown
COG id: COG3769
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. MPGP family [H]
Homologues:
Organism=Escherichia coli, GI1788265, Length=239, Percent_Identity=31.3807531380753, Blast_Score=107, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR006379 - InterPro: IPR006381 - InterPro: IPR012815 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: =3.1.3.70 [H]
Molecular weight: Translated: 30058; Mature: 30058
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNSKYWIVTDLDGTLMDEDYDITPAKETLKILAELNIPVIPCTSKTASEVRYFRKENA CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCC LTDPFIVENGAAVYGCYEQNSSEWELILGKSYSELKTILFNISKKVNFHLTPLNDLSKNQ CCCCEEEECCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC IFELTGLSDQGITRALDRCWSVPFLNPPDEIFENVKFICDFYNVHVFKGNRMSHLLSSES EEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEEEEEECCHHHHHHCCCC HKGKAVNKLKVYLQNNDVKIIALGDSQNDLPLLEYADISIVIPGKNGPNKYLQNGIDNGS CCCCCEEEEEEEEECCCEEEEEECCCCCCCCEEEECCEEEEECCCCCCHHHHHCCCCCCC FRLANAPHAEGWANSVQDIIKDFMDL EEECCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNNSKYWIVTDLDGTLMDEDYDITPAKETLKILAELNIPVIPCTSKTASEVRYFRKENA CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCC LTDPFIVENGAAVYGCYEQNSSEWELILGKSYSELKTILFNISKKVNFHLTPLNDLSKNQ CCCCEEEECCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC IFELTGLSDQGITRALDRCWSVPFLNPPDEIFENVKFICDFYNVHVFKGNRMSHLLSSES EEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEEEEEECCHHHHHHCCCC HKGKAVNKLKVYLQNNDVKIIALGDSQNDLPLLEYADISIVIPGKNGPNKYLQNGIDNGS CCCCCEEEEEEEEECCCEEEEEECCCCCCCCEEEECCEEEEECCCCCCHHHHHCCCCCCC FRLANAPHAEGWANSVQDIIKDFMDL EEECCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA