Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is yedP [C]

Identifier: 124025622

GI number: 124025622

Start: 846969

End: 847769

Strand: Direct

Name: yedP [C]

Synonym: NATL1_09151

Alternate gene names: 124025622

Gene position: 846969-847769 (Clockwise)

Preceding gene: 124025621

Following gene: 124025623

Centisome position: 45.42

GC content: 31.71

Gene sequence:

>801_bases
ATGAAAAATAATTCTAAATATTGGATAGTTACAGATCTTGATGGCACTTTAATGGACGAAGATTACGATATAACTCCTGC
CAAAGAAACCTTAAAAATATTGGCAGAATTGAATATTCCTGTAATACCTTGTACTAGTAAAACTGCTTCTGAAGTTAGAT
ATTTTAGAAAAGAGAATGCATTGACAGATCCTTTTATTGTCGAAAATGGAGCGGCTGTTTATGGGTGTTATGAACAAAAT
TCGTCGGAATGGGAATTGATCTTAGGAAAAAGTTATTCTGAATTAAAAACTATATTATTTAATATCTCTAAAAAAGTTAA
CTTCCACTTAACCCCATTAAATGATTTAAGCAAAAATCAAATATTTGAACTTACGGGATTATCTGATCAAGGTATTACTA
GAGCTCTTGATAGGTGCTGGAGTGTTCCATTCTTAAATCCTCCTGATGAAATTTTTGAGAATGTAAAGTTTATTTGTGAT
TTTTATAATGTGCATGTTTTTAAAGGAAATAGAATGAGTCATTTACTCTCCAGTGAAAGTCATAAAGGTAAAGCTGTTAA
TAAATTAAAGGTTTATCTACAGAACAATGATGTAAAGATTATTGCACTTGGGGATTCGCAAAATGATCTTCCTTTACTTG
AATATGCCGATATATCTATCGTTATTCCTGGCAAAAATGGCCCAAATAAGTACTTACAGAATGGTATTGATAATGGCTCT
TTTAGATTAGCAAATGCCCCGCACGCAGAGGGGTGGGCAAATAGTGTTCAGGATATTATTAAAGATTTTATGGATTTATG
A

Upstream 100 bases:

>100_bases
AAACGTTTACTAGATAATATTTCAGGTTCTTATTTTAATACTGATACTTTTAAACTTAATCCTTATCAAGTCGTTTGGCT
TACATTAGCTGATTAGTTTT

Downstream 100 bases:

>100_bases
AAGATAAAGATATTAATAATGATTTTAATCATATTTTCCCAGAGGATATAAGGGACGATTTCCTTTTTTCTCTCGATAGT
TATCGTCTATTTCTTGAAGG

Product: mannosyl-3-phosphoglycerate phosphatase

Products: NA

Alternate protein names: MPGP [H]

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKNNSKYWIVTDLDGTLMDEDYDITPAKETLKILAELNIPVIPCTSKTASEVRYFRKENALTDPFIVENGAAVYGCYEQN
SSEWELILGKSYSELKTILFNISKKVNFHLTPLNDLSKNQIFELTGLSDQGITRALDRCWSVPFLNPPDEIFENVKFICD
FYNVHVFKGNRMSHLLSSESHKGKAVNKLKVYLQNNDVKIIALGDSQNDLPLLEYADISIVIPGKNGPNKYLQNGIDNGS
FRLANAPHAEGWANSVQDIIKDFMDL

Sequences:

>Translated_266_residues
MKNNSKYWIVTDLDGTLMDEDYDITPAKETLKILAELNIPVIPCTSKTASEVRYFRKENALTDPFIVENGAAVYGCYEQN
SSEWELILGKSYSELKTILFNISKKVNFHLTPLNDLSKNQIFELTGLSDQGITRALDRCWSVPFLNPPDEIFENVKFICD
FYNVHVFKGNRMSHLLSSESHKGKAVNKLKVYLQNNDVKIIALGDSQNDLPLLEYADISIVIPGKNGPNKYLQNGIDNGS
FRLANAPHAEGWANSVQDIIKDFMDL
>Mature_266_residues
MKNNSKYWIVTDLDGTLMDEDYDITPAKETLKILAELNIPVIPCTSKTASEVRYFRKENALTDPFIVENGAAVYGCYEQN
SSEWELILGKSYSELKTILFNISKKVNFHLTPLNDLSKNQIFELTGLSDQGITRALDRCWSVPFLNPPDEIFENVKFICD
FYNVHVFKGNRMSHLLSSESHKGKAVNKLKVYLQNNDVKIIALGDSQNDLPLLEYADISIVIPGKNGPNKYLQNGIDNGS
FRLANAPHAEGWANSVQDIIKDFMDL

Specific function: Unknown

COG id: COG3769

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. MPGP family [H]

Homologues:

Organism=Escherichia coli, GI1788265, Length=239, Percent_Identity=31.3807531380753, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR006381
- InterPro:   IPR012815 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.70 [H]

Molecular weight: Translated: 30058; Mature: 30058

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNSKYWIVTDLDGTLMDEDYDITPAKETLKILAELNIPVIPCTSKTASEVRYFRKENA
CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCC
LTDPFIVENGAAVYGCYEQNSSEWELILGKSYSELKTILFNISKKVNFHLTPLNDLSKNQ
CCCCEEEECCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC
IFELTGLSDQGITRALDRCWSVPFLNPPDEIFENVKFICDFYNVHVFKGNRMSHLLSSES
EEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEEEEEECCHHHHHHCCCC
HKGKAVNKLKVYLQNNDVKIIALGDSQNDLPLLEYADISIVIPGKNGPNKYLQNGIDNGS
CCCCCEEEEEEEEECCCEEEEEECCCCCCCCEEEECCEEEEECCCCCCHHHHHCCCCCCC
FRLANAPHAEGWANSVQDIIKDFMDL
EEECCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNNSKYWIVTDLDGTLMDEDYDITPAKETLKILAELNIPVIPCTSKTASEVRYFRKENA
CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCC
LTDPFIVENGAAVYGCYEQNSSEWELILGKSYSELKTILFNISKKVNFHLTPLNDLSKNQ
CCCCEEEECCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC
IFELTGLSDQGITRALDRCWSVPFLNPPDEIFENVKFICDFYNVHVFKGNRMSHLLSSES
EEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEEEEEECCHHHHHHCCCC
HKGKAVNKLKVYLQNNDVKIIALGDSQNDLPLLEYADISIVIPGKNGPNKYLQNGIDNGS
CCCCCEEEEEEEEECCCEEEEEECCCCCCCCEEEECCEEEEECCCCCCHHHHHCCCCCCC
FRLANAPHAEGWANSVQDIIKDFMDL
EEECCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA