Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025610
Identifier: 124025610
GI number: 124025610
Start: 837936
End: 838724
Strand: Direct
Name: 124025610
Synonym: NATL1_09031
Alternate gene names: NA
Gene position: 837936-838724 (Clockwise)
Preceding gene: 124025609
Following gene: 124025612
Centisome position: 44.94
GC content: 32.07
Gene sequence:
>789_bases ATGCAGCGATACCTTAAAACTATTAGGTTATTTTGGTCTACAGCATTTGCTTCTCAACTTGAATATCAATTAAATTTTTT GATTGAGTTGCTCGCTATGTTGGGAACCCTTTTGGGAAGCGTATTTATATTATCCCTTTTTTTTACTGGAGGAAGGCAAT TAGGAGATTGGACTTGGGAATCAGCCTTAGTTATTCAGGGTGTTTATACATTTCTTGATGGTTTAACGAATGCTCTTTTA CGACCAAATTTAACCGAAATTGTTAATTACGTTAGAGAGGGTACTCTCGATTATGTTTTATTAAAACCAATTGATAGTCA ATTTTGGCTATCAGTTAAAAAGTTTTCTTTTGCAGGATTGCCTGAAATTATTTTAGGACTTTCAATTGTTTTTTGGGCGG CTATCCAATCAGGTTCAACTTTTTCAATTTACTCATTATTCGTATTCATTATTTCCTTATTGATTGGTTTTATTATTCTT TATTCTGTTTGGTTTCTAATTGCTGCATCAAGTATTTGGTTTGTTAAGACATGGAATGCTACAGAAGTTCTTAGAGCTTT GTTAGCTGCAGGTAGATACCCTGTTTCAGCTTATCCTGTTATTTTAAGATTCATATTTACTTTGGTTTTACCTGTAGCTT TTTTAACCACTTTTCCTGCTGAGGCTATTCTGGGAGAGCTTAAATTTAATATTTTATTTTTTGGCCTAATATTAAGTAGT TTATTTTTTATTTTTAGCAGACTCTTCTGGAAATTTGCTCTTAAACATTATACTTCTGCCTCAAGTTAA
Upstream 100 bases:
>100_bases GGCTTTTTAGCTCAGATTTTGTGGATTTCAATACTGGTACCTTCTGTAAATATTCTTTGGAAACTTGGTGTAAAAAGATA TACAGCAATGGGAGCCTAAT
Downstream 100 bases:
>100_bases TTATTTAATTAACTTCATTAACTATTTTTATTTTAACGAAATTATAAATTATGAGCTTATTGTCCAATACCAAAGAATGA GTTGAATATGAATAATAAAC
Product: membrane protein, multidrug efflux associated
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MQRYLKTIRLFWSTAFASQLEYQLNFLIELLAMLGTLLGSVFILSLFFTGGRQLGDWTWESALVIQGVYTFLDGLTNALL RPNLTEIVNYVREGTLDYVLLKPIDSQFWLSVKKFSFAGLPEIILGLSIVFWAAIQSGSTFSIYSLFVFIISLLIGFIIL YSVWFLIAASSIWFVKTWNATEVLRALLAAGRYPVSAYPVILRFIFTLVLPVAFLTTFPAEAILGELKFNILFFGLILSS LFFIFSRLFWKFALKHYTSASS
Sequences:
>Translated_262_residues MQRYLKTIRLFWSTAFASQLEYQLNFLIELLAMLGTLLGSVFILSLFFTGGRQLGDWTWESALVIQGVYTFLDGLTNALL RPNLTEIVNYVREGTLDYVLLKPIDSQFWLSVKKFSFAGLPEIILGLSIVFWAAIQSGSTFSIYSLFVFIISLLIGFIIL YSVWFLIAASSIWFVKTWNATEVLRALLAAGRYPVSAYPVILRFIFTLVLPVAFLTTFPAEAILGELKFNILFFGLILSS LFFIFSRLFWKFALKHYTSASS >Mature_262_residues MQRYLKTIRLFWSTAFASQLEYQLNFLIELLAMLGTLLGSVFILSLFFTGGRQLGDWTWESALVIQGVYTFLDGLTNALL RPNLTEIVNYVREGTLDYVLLKPIDSQFWLSVKKFSFAGLPEIILGLSIVFWAAIQSGSTFSIYSLFVFIISLLIGFIIL YSVWFLIAASSIWFVKTWNATEVLRALLAAGRYPVSAYPVILRFIFTLVLPVAFLTTFPAEAILGELKFNILFFGLILSS LFFIFSRLFWKFALKHYTSASS
Specific function: Unknown
COG id: COG3694
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29801; Mature: 29801
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRYLKTIRLFWSTAFASQLEYQLNFLIELLAMLGTLLGSVFILSLFFTGGRQLGDWTWE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH SALVIQGVYTFLDGLTNALLRPNLTEIVNYVREGTLDYVLLKPIDSQFWLSVKKFSFAGL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCH PEIILGLSIVFWAAIQSGSTFSIYSLFVFIISLLIGFIILYSVWFLIAASSIWFVKTWNA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCH TEVLRALLAAGRYPVSAYPVILRFIFTLVLPVAFLTTFPAEAILGELKFNILFFGLILSS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LFFIFSRLFWKFALKHYTSASS HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQRYLKTIRLFWSTAFASQLEYQLNFLIELLAMLGTLLGSVFILSLFFTGGRQLGDWTWE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH SALVIQGVYTFLDGLTNALLRPNLTEIVNYVREGTLDYVLLKPIDSQFWLSVKKFSFAGL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCH PEIILGLSIVFWAAIQSGSTFSIYSLFVFIISLLIGFIILYSVWFLIAASSIWFVKTWNA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCH TEVLRALLAAGRYPVSAYPVILRFIFTLVLPVAFLTTFPAEAILGELKFNILFFGLILSS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LFFIFSRLFWKFALKHYTSASS HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA