Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124025610

Identifier: 124025610

GI number: 124025610

Start: 837936

End: 838724

Strand: Direct

Name: 124025610

Synonym: NATL1_09031

Alternate gene names: NA

Gene position: 837936-838724 (Clockwise)

Preceding gene: 124025609

Following gene: 124025612

Centisome position: 44.94

GC content: 32.07

Gene sequence:

>789_bases
ATGCAGCGATACCTTAAAACTATTAGGTTATTTTGGTCTACAGCATTTGCTTCTCAACTTGAATATCAATTAAATTTTTT
GATTGAGTTGCTCGCTATGTTGGGAACCCTTTTGGGAAGCGTATTTATATTATCCCTTTTTTTTACTGGAGGAAGGCAAT
TAGGAGATTGGACTTGGGAATCAGCCTTAGTTATTCAGGGTGTTTATACATTTCTTGATGGTTTAACGAATGCTCTTTTA
CGACCAAATTTAACCGAAATTGTTAATTACGTTAGAGAGGGTACTCTCGATTATGTTTTATTAAAACCAATTGATAGTCA
ATTTTGGCTATCAGTTAAAAAGTTTTCTTTTGCAGGATTGCCTGAAATTATTTTAGGACTTTCAATTGTTTTTTGGGCGG
CTATCCAATCAGGTTCAACTTTTTCAATTTACTCATTATTCGTATTCATTATTTCCTTATTGATTGGTTTTATTATTCTT
TATTCTGTTTGGTTTCTAATTGCTGCATCAAGTATTTGGTTTGTTAAGACATGGAATGCTACAGAAGTTCTTAGAGCTTT
GTTAGCTGCAGGTAGATACCCTGTTTCAGCTTATCCTGTTATTTTAAGATTCATATTTACTTTGGTTTTACCTGTAGCTT
TTTTAACCACTTTTCCTGCTGAGGCTATTCTGGGAGAGCTTAAATTTAATATTTTATTTTTTGGCCTAATATTAAGTAGT
TTATTTTTTATTTTTAGCAGACTCTTCTGGAAATTTGCTCTTAAACATTATACTTCTGCCTCAAGTTAA

Upstream 100 bases:

>100_bases
GGCTTTTTAGCTCAGATTTTGTGGATTTCAATACTGGTACCTTCTGTAAATATTCTTTGGAAACTTGGTGTAAAAAGATA
TACAGCAATGGGAGCCTAAT

Downstream 100 bases:

>100_bases
TTATTTAATTAACTTCATTAACTATTTTTATTTTAACGAAATTATAAATTATGAGCTTATTGTCCAATACCAAAGAATGA
GTTGAATATGAATAATAAAC

Product: membrane protein, multidrug efflux associated

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MQRYLKTIRLFWSTAFASQLEYQLNFLIELLAMLGTLLGSVFILSLFFTGGRQLGDWTWESALVIQGVYTFLDGLTNALL
RPNLTEIVNYVREGTLDYVLLKPIDSQFWLSVKKFSFAGLPEIILGLSIVFWAAIQSGSTFSIYSLFVFIISLLIGFIIL
YSVWFLIAASSIWFVKTWNATEVLRALLAAGRYPVSAYPVILRFIFTLVLPVAFLTTFPAEAILGELKFNILFFGLILSS
LFFIFSRLFWKFALKHYTSASS

Sequences:

>Translated_262_residues
MQRYLKTIRLFWSTAFASQLEYQLNFLIELLAMLGTLLGSVFILSLFFTGGRQLGDWTWESALVIQGVYTFLDGLTNALL
RPNLTEIVNYVREGTLDYVLLKPIDSQFWLSVKKFSFAGLPEIILGLSIVFWAAIQSGSTFSIYSLFVFIISLLIGFIIL
YSVWFLIAASSIWFVKTWNATEVLRALLAAGRYPVSAYPVILRFIFTLVLPVAFLTTFPAEAILGELKFNILFFGLILSS
LFFIFSRLFWKFALKHYTSASS
>Mature_262_residues
MQRYLKTIRLFWSTAFASQLEYQLNFLIELLAMLGTLLGSVFILSLFFTGGRQLGDWTWESALVIQGVYTFLDGLTNALL
RPNLTEIVNYVREGTLDYVLLKPIDSQFWLSVKKFSFAGLPEIILGLSIVFWAAIQSGSTFSIYSLFVFIISLLIGFIIL
YSVWFLIAASSIWFVKTWNATEVLRALLAAGRYPVSAYPVILRFIFTLVLPVAFLTTFPAEAILGELKFNILFFGLILSS
LFFIFSRLFWKFALKHYTSASS

Specific function: Unknown

COG id: COG3694

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29801; Mature: 29801

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRYLKTIRLFWSTAFASQLEYQLNFLIELLAMLGTLLGSVFILSLFFTGGRQLGDWTWE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
SALVIQGVYTFLDGLTNALLRPNLTEIVNYVREGTLDYVLLKPIDSQFWLSVKKFSFAGL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCH
PEIILGLSIVFWAAIQSGSTFSIYSLFVFIISLLIGFIILYSVWFLIAASSIWFVKTWNA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCH
TEVLRALLAAGRYPVSAYPVILRFIFTLVLPVAFLTTFPAEAILGELKFNILFFGLILSS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LFFIFSRLFWKFALKHYTSASS
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQRYLKTIRLFWSTAFASQLEYQLNFLIELLAMLGTLLGSVFILSLFFTGGRQLGDWTWE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
SALVIQGVYTFLDGLTNALLRPNLTEIVNYVREGTLDYVLLKPIDSQFWLSVKKFSFAGL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCH
PEIILGLSIVFWAAIQSGSTFSIYSLFVFIISLLIGFIILYSVWFLIAASSIWFVKTWNA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCH
TEVLRALLAAGRYPVSAYPVILRFIFTLVLPVAFLTTFPAEAILGELKFNILFFGLILSS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LFFIFSRLFWKFALKHYTSASS
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA