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The map label for this gene is pnil34 [H]

Identifier: 124025601

GI number: 124025601

Start: 832156

End: 833259

Strand: Direct

Name: pnil34 [H]

Synonym: NATL1_08941

Alternate gene names: 124025601

Gene position: 832156-833259 (Clockwise)

Preceding gene: 124025600

Following gene: 124025605

Centisome position: 44.63

GC content: 37.23

Gene sequence:

>1104_bases
ATGACCGCAACAGCTTCTTCACCAAAACTAAGAGTTGATACACGCGGAACAAATGAGTTGCCGCCACATTTAGATGAAAA
CCTTTTAACCCCTCGTTTTTACGTAACTGAATTTAAAAAAGCAGCTAAGACAGAATTAACTGATGCGCGCGAAGAGTTTG
AAGCAATGCTCTCAGAAATGAAAGCGGATTATAACTGTACTCATTTTGATAGGAAGGCAAGTCTAGATAGATTACAAGAA
TTGCCTCAGAAGGCTAAAGAGACTTATGAGAGTTATCTAGTTAGATCTGTTATATCAGAGTTTTCTGGATTCCTACTATT
CAAGGAGATTTCCAATCGTTTGAAGAAAGAGGGAAATAGGGATCTTGGAAAACTATTTCAGTTTTTAGCTAGAGACGAAG
CTAGACATGCAGGCTTCCTAAGCAGAGCATTAGTTGCAGAGGGTATTGAAGTGGATCTCCCTCATTTAGGAGGAAAAAGG
GCAGCGACTTGGTTCCCCATTAGTTGGGTTATTTATTCTGTGTATCTTTCAGAAAAGATTGGGTATTGGAGATATATCTT
GATGGATAGGCACCTTAAGGCTAATCCAGATCAGGCTTTTGCTCCTCTTTTTGATTTCTTTGAGCCATGGTGTCAAGACG
AGAACAGACATGGTGATTGTTTTACAGTAATGATGAGATGTTGGCCTGGAATTACCAAAGGATTTAGAGGTAAGTTATTA
AGTCGTTTCTTCTTGTGGAGCGTTTTCCTTACTCACACTTTGACAGTTTGCGAAAGAGGAGAGTTTTATGAATTACTTGG
TATTGATCCAAAGGAGTTTGATGAGGAAGTGATAAAAAGAACAAACCACACATCAAAAAATGCCTTCCCTTGGGTTTTTA
ATCTTGATGACAATAAGTTTTGGGATTTGAGAAACAAAATTATCGAATCATTCAGAGCTTTTGTAGGTGCTAAAGGTTTA
ACAAAGCCAGTTAAATTTGTGAAATTCGCTACTTTGATATTTAAGCAATTTGCACTCCCAATGGAGAAGACAAATGCATT
GAGATATGATAAAAACGTGAATTTTACAGGTCAGGATATTTTGAATTTTTGGACAGATAAATAA

Upstream 100 bases:

>100_bases
TTTTTAGTCGTTTTAAGCAAAGCTCTATTACTACCTGATTAAAAATTCACCTTTTTTTCAAATAAAGACATACAATTATG
TTCTTGCTTGATAATTAGGG

Downstream 100 bases:

>100_bases
GACTATTTGGATAAATTAAATATCAAAAGGATTACCAGCTTGTGTGTCTAATCCTTTAAAATATTTTCCAAATTGTGCGT
TATATACTTCGTCCTCATCT

Product: magnesium-protoporphyrin IX monomethyl ester cyclase

Products: NA

Alternate protein names: Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTATASSPKLRVDTRGTNELPPHLDENLLTPRFYVTEFKKAAKTELTDAREEFEAMLSEMKADYNCTHFDRKASLDRLQE
LPQKAKETYESYLVRSVISEFSGFLLFKEISNRLKKEGNRDLGKLFQFLARDEARHAGFLSRALVAEGIEVDLPHLGGKR
AATWFPISWVIYSVYLSEKIGYWRYILMDRHLKANPDQAFAPLFDFFEPWCQDENRHGDCFTVMMRCWPGITKGFRGKLL
SRFFLWSVFLTHTLTVCERGEFYELLGIDPKEFDEEVIKRTNHTSKNAFPWVFNLDDNKFWDLRNKIIESFRAFVGAKGL
TKPVKFVKFATLIFKQFALPMEKTNALRYDKNVNFTGQDILNFWTDK

Sequences:

>Translated_367_residues
MTATASSPKLRVDTRGTNELPPHLDENLLTPRFYVTEFKKAAKTELTDAREEFEAMLSEMKADYNCTHFDRKASLDRLQE
LPQKAKETYESYLVRSVISEFSGFLLFKEISNRLKKEGNRDLGKLFQFLARDEARHAGFLSRALVAEGIEVDLPHLGGKR
AATWFPISWVIYSVYLSEKIGYWRYILMDRHLKANPDQAFAPLFDFFEPWCQDENRHGDCFTVMMRCWPGITKGFRGKLL
SRFFLWSVFLTHTLTVCERGEFYELLGIDPKEFDEEVIKRTNHTSKNAFPWVFNLDDNKFWDLRNKIIESFRAFVGAKGL
TKPVKFVKFATLIFKQFALPMEKTNALRYDKNVNFTGQDILNFWTDK
>Mature_366_residues
TATASSPKLRVDTRGTNELPPHLDENLLTPRFYVTEFKKAAKTELTDAREEFEAMLSEMKADYNCTHFDRKASLDRLQEL
PQKAKETYESYLVRSVISEFSGFLLFKEISNRLKKEGNRDLGKLFQFLARDEARHAGFLSRALVAEGIEVDLPHLGGKRA
ATWFPISWVIYSVYLSEKIGYWRYILMDRHLKANPDQAFAPLFDFFEPWCQDENRHGDCFTVMMRCWPGITKGFRGKLLS
RFFLWSVFLTHTLTVCERGEFYELLGIDPKEFDEEVIKRTNHTSKNAFPWVFNLDDNKFWDLRNKIIESFRAFVGAKGLT
KPVKFVKFATLIFKQFALPMEKTNALRYDKNVNFTGQDILNFWTDK

Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomet

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AcsF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008434
- InterPro:   IPR009078
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: =1.14.13.81 [H]

Molecular weight: Translated: 42927; Mature: 42795

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATASSPKLRVDTRGTNELPPHLDENLLTPRFYVTEFKKAAKTELTDAREEFEAMLSEM
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KADYNCTHFDRKASLDRLQELPQKAKETYESYLVRSVISEFSGFLLFKEISNRLKKEGNR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLGKLFQFLARDEARHAGFLSRALVAEGIEVDLPHLGGKRAATWFPISWVIYSVYLSEKI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC
GYWRYILMDRHLKANPDQAFAPLFDFFEPWCQDENRHGDCFTVMMRCWPGITKGFRGKLL
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
SRFFLWSVFLTHTLTVCERGEFYELLGIDPKEFDEEVIKRTNHTSKNAFPWVFNLDDNKF
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCH
WDLRNKIIESFRAFVGAKGLTKPVKFVKFATLIFKQFALPMEKTNALRYDKNVNFTGQDI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCHHHH
LNFWTDK
HHHHCCC
>Mature Secondary Structure 
TATASSPKLRVDTRGTNELPPHLDENLLTPRFYVTEFKKAAKTELTDAREEFEAMLSEM
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KADYNCTHFDRKASLDRLQELPQKAKETYESYLVRSVISEFSGFLLFKEISNRLKKEGNR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLGKLFQFLARDEARHAGFLSRALVAEGIEVDLPHLGGKRAATWFPISWVIYSVYLSEKI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC
GYWRYILMDRHLKANPDQAFAPLFDFFEPWCQDENRHGDCFTVMMRCWPGITKGFRGKLL
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
SRFFLWSVFLTHTLTVCERGEFYELLGIDPKEFDEEVIKRTNHTSKNAFPWVFNLDDNKF
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCH
WDLRNKIIESFRAFVGAKGLTKPVKFVKFATLIFKQFALPMEKTNALRYDKNVNFTGQDI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCHHHH
LNFWTDK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA