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The map label for this gene is capD [H]

Identifier: 124025566

GI number: 124025566

Start: 788809

End: 790689

Strand: Reverse

Name: capD [H]

Synonym: NATL1_08591

Alternate gene names: 124025566

Gene position: 790689-788809 (Counterclockwise)

Preceding gene: 124025567

Following gene: 124025565

Centisome position: 42.4

GC content: 29.93

Gene sequence:

>1881_bases
ATGCTTGCCAGCGCTGCTAATAAAATTCTCTCTTTATCGTCTAAAAAGCGGCTTTCAATTCTTATATTTATTGATATAGT
CATAATTATATTTTCGAGTAAGTTAGGACTATATTTAACAAGTAGAGATTACTTTAATGATTCTTACTTTTCTATATTCA
TAACACTTATTACAATATTTATAGGTATAACCTGTTATATAATAAGTGGACAATATATTGGTATAACTAGATATTTAAGC
AGTAGAGATTTAAATCATCTTATAATTAGGAATTTTATAATTACAGTATTAACAAGAATAACTCTTATCTTCTTTCAAGT
AGAATTACCATCCTTAGGATATTTTATTTTATTATGGATTTTATTATCAACATCAAGTGTATATATTAGATTTTTTATGC
GTGATTTTATCCTAAAAATTAAGATCTCAAAAAATAAAAATAGGAAAAAAGTTATTATTTATGGGGCAGGTGAGGCAGGG
GCTCAACTAGCATCATCCTTAATTCAGGATGGGCGTTATTGCGTTGAGGGATTTATCGATGATGATTCAAGCCTTTGGCG
GAGGAACATAAAAGGTATACCCATATATCCTCCAAATAGAATTTATGAAAATAAAGCTCATATTGATCAGGTTCTTTTAG
CAATACCTTCCCTAAGAAAAAAAAAGCGACTTGAAATTTTACATACACTCTATAAAAAAGGGGTTTCGGTACTTCAAATA
CCTTCTATTGATGAAATAAAGAGTGAAAAGAATCTTATTACATCATTAAAACCTGTAAAAGTTGAAGATATTCTCGGACG
AGAGCCAATTAATCCTGATAATAATCTTTTAAACATAGCAGTGAAAGGGCAAACAGTTTGCATAACAGGTGCAGGTGGAT
CTATAGGTAGTGAATTATCCAAACAAATATATAATTTAAACCCCTATAAAATGATATTAATAGATCATAGTGAATCTCAT
CTTTATAATATAAATAAGCAAATTACTTCCTATCCTGATAATGGTATAGAAGTTAAAGCAATTCTAGGAAGTACAACAGA
TTTACCATTTATTAATAAAGTTTTTACTGATAATAATGTAGATATAATTTTTCATGCTGCTGCATATAAACATGTTCCTC
TTGTTGAATCAAATCCCTTAAAAGGCTTATTTAATAATGTTTTTTCTACTGAAATAGTTTGTAAAGCAGCATTAGAAGCA
GGAGCTAATAATTTAGTTCTGATCTCAACAGATAAAGCTGTTCGACCCACCAATGTAATGGGTGCCTCCAAGAGGCTTTC
AGAATTAGTTGTTCAAGCGATTGCAGAGAAATCAAAAGAGAATTCTATTGCTAAAAAAACATGTTTTTCTATGGTTCGAT
TTGGGAATGTACTTGGATCTTCTGGTTCAGTTTTACCACTTTTTCAAGAGCAAATTGATAATGGTGGTCCAATAACTTTG
ACCCATCCAAGAATAATTAGATATTTTATGACTATTTCGGAAGCTTCTCAATTAGTAATTCAATCAAAGGTCCTTGCAGA
GGGGGGGGATGTATTTCATCTCGATATGGGAAAACCAGTGAGCATTAAATCATTAGCAGAGCAATTAATACTTTTAAATG
GTTTATCTATTAAAGATAATAAAAATTTAGAAGGAGATATAGAAATAAAATTTACTGGTCTAAGACCAGGAGAAAAATTA
TATGAAGAATTGATCATAGATGCAGAATCTAAGAAAACAATTCATCCTCTTATCTATCGTGCAGATGAGAGATTTATTCC
TTTGGATATAATTATGCCAACATTAGAAATACTACGAAGATATTTAGATAACGAGGATAAAATCAATAGTCTTTTGATTT
TGAAAGAGCTTGTGCCTGAATGGCAGACTAATTTAATTTAA

Upstream 100 bases:

>100_bases
AGCTCAGGCGTAAATCAATCCTAAAGAATATAGCCCAAAAAATCTAGTATAGTATTATAGATTAATAGTTTTCTAGATTT
CTATGTTATAATTAAGAAAA

Downstream 100 bases:

>100_bases
AAAGTTTAAAATTAATAATATTATTATAATTAAAAATAATAATAGATACTATAATTTATTATAATATCTATTATTATTTT
TAAAATTAGTTGAAACGTAT

Product: nucleotide-diphosphate-sugar epimerase, membrane associated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MLASAANKILSLSSKKRLSILIFIDIVIIIFSSKLGLYLTSRDYFNDSYFSIFITLITIFIGITCYIISGQYIGITRYLS
SRDLNHLIIRNFIITVLTRITLIFFQVELPSLGYFILLWILLSTSSVYIRFFMRDFILKIKISKNKNRKKVIIYGAGEAG
AQLASSLIQDGRYCVEGFIDDDSSLWRRNIKGIPIYPPNRIYENKAHIDQVLLAIPSLRKKKRLEILHTLYKKGVSVLQI
PSIDEIKSEKNLITSLKPVKVEDILGREPINPDNNLLNIAVKGQTVCITGAGGSIGSELSKQIYNLNPYKMILIDHSESH
LYNINKQITSYPDNGIEVKAILGSTTDLPFINKVFTDNNVDIIFHAAAYKHVPLVESNPLKGLFNNVFSTEIVCKAALEA
GANNLVLISTDKAVRPTNVMGASKRLSELVVQAIAEKSKENSIAKKTCFSMVRFGNVLGSSGSVLPLFQEQIDNGGPITL
THPRIIRYFMTISEASQLVIQSKVLAEGGDVFHLDMGKPVSIKSLAEQLILLNGLSIKDNKNLEGDIEIKFTGLRPGEKL
YEELIIDAESKKTIHPLIYRADERFIPLDIIMPTLEILRRYLDNEDKINSLLILKELVPEWQTNLI

Sequences:

>Translated_626_residues
MLASAANKILSLSSKKRLSILIFIDIVIIIFSSKLGLYLTSRDYFNDSYFSIFITLITIFIGITCYIISGQYIGITRYLS
SRDLNHLIIRNFIITVLTRITLIFFQVELPSLGYFILLWILLSTSSVYIRFFMRDFILKIKISKNKNRKKVIIYGAGEAG
AQLASSLIQDGRYCVEGFIDDDSSLWRRNIKGIPIYPPNRIYENKAHIDQVLLAIPSLRKKKRLEILHTLYKKGVSVLQI
PSIDEIKSEKNLITSLKPVKVEDILGREPINPDNNLLNIAVKGQTVCITGAGGSIGSELSKQIYNLNPYKMILIDHSESH
LYNINKQITSYPDNGIEVKAILGSTTDLPFINKVFTDNNVDIIFHAAAYKHVPLVESNPLKGLFNNVFSTEIVCKAALEA
GANNLVLISTDKAVRPTNVMGASKRLSELVVQAIAEKSKENSIAKKTCFSMVRFGNVLGSSGSVLPLFQEQIDNGGPITL
THPRIIRYFMTISEASQLVIQSKVLAEGGDVFHLDMGKPVSIKSLAEQLILLNGLSIKDNKNLEGDIEIKFTGLRPGEKL
YEELIIDAESKKTIHPLIYRADERFIPLDIIMPTLEILRRYLDNEDKINSLLILKELVPEWQTNLI
>Mature_626_residues
MLASAANKILSLSSKKRLSILIFIDIVIIIFSSKLGLYLTSRDYFNDSYFSIFITLITIFIGITCYIISGQYIGITRYLS
SRDLNHLIIRNFIITVLTRITLIFFQVELPSLGYFILLWILLSTSSVYIRFFMRDFILKIKISKNKNRKKVIIYGAGEAG
AQLASSLIQDGRYCVEGFIDDDSSLWRRNIKGIPIYPPNRIYENKAHIDQVLLAIPSLRKKKRLEILHTLYKKGVSVLQI
PSIDEIKSEKNLITSLKPVKVEDILGREPINPDNNLLNIAVKGQTVCITGAGGSIGSELSKQIYNLNPYKMILIDHSESH
LYNINKQITSYPDNGIEVKAILGSTTDLPFINKVFTDNNVDIIFHAAAYKHVPLVESNPLKGLFNNVFSTEIVCKAALEA
GANNLVLISTDKAVRPTNVMGASKRLSELVVQAIAEKSKENSIAKKTCFSMVRFGNVLGSSGSVLPLFQEQIDNGGPITL
THPRIIRYFMTISEASQLVIQSKVLAEGGDVFHLDMGKPVSIKSLAEQLILLNGLSIKDNKNLEGDIEIKFTGLRPGEKL
YEELIIDAESKKTIHPLIYRADERFIPLDIIMPTLEILRRYLDNEDKINSLLILKELVPEWQTNLI

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 70324; Mature: 70324

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASAANKILSLSSKKRLSILIFIDIVIIIFSSKLGLYLTSRDYFNDSYFSIFITLITIF
CCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH
IGITCYIISGQYIGITRYLSSRDLNHLIIRNFIITVLTRITLIFFQVELPSLGYFILLWI
HHHEEEEECCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHH
LLSTSSVYIRFFMRDFILKIKISKNKNRKKVIIYGAGEAGAQLASSLIQDGRYCVEGFID
HHHCCHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEC
DDSSLWRRNIKGIPIYPPNRIYENKAHIDQVLLAIPSLRKKKRLEILHTLYKKGVSVLQI
CCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEC
PSIDEIKSEKNLITSLKPVKVEDILGREPINPDNNLLNIAVKGQTVCITGAGGSIGSELS
CCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHH
KQIYNLNPYKMILIDHSESHLYNINKQITSYPDNGIEVKAILGSTTDLPFINKVFTDNNV
HHHHCCCCEEEEEEECCCCCEEECCHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCCCC
DIIFHAAAYKHVPLVESNPLKGLFNNVFSTEIVCKAALEAGANNLVLISTDKAVRPTNVM
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
GASKRLSELVVQAIAEKSKENSIAKKTCFSMVRFGNVLGSSGSVLPLFQEQIDNGGPITL
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCEEE
THPRIIRYFMTISEASQLVIQSKVLAEGGDVFHLDMGKPVSIKSLAEQLILLNGLSIKDN
ECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
KNLEGDIEIKFTGLRPGEKLYEELIIDAESKKTIHPLIYRADERFIPLDIIMPTLEILRR
CCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHEEECCCCEEEHHHHHHHHHHHHH
YLDNEDKINSLLILKELVPEWQTNLI
HCCCCHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MLASAANKILSLSSKKRLSILIFIDIVIIIFSSKLGLYLTSRDYFNDSYFSIFITLITIF
CCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH
IGITCYIISGQYIGITRYLSSRDLNHLIIRNFIITVLTRITLIFFQVELPSLGYFILLWI
HHHEEEEECCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHH
LLSTSSVYIRFFMRDFILKIKISKNKNRKKVIIYGAGEAGAQLASSLIQDGRYCVEGFID
HHHCCHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEC
DDSSLWRRNIKGIPIYPPNRIYENKAHIDQVLLAIPSLRKKKRLEILHTLYKKGVSVLQI
CCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEC
PSIDEIKSEKNLITSLKPVKVEDILGREPINPDNNLLNIAVKGQTVCITGAGGSIGSELS
CCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHH
KQIYNLNPYKMILIDHSESHLYNINKQITSYPDNGIEVKAILGSTTDLPFINKVFTDNNV
HHHHCCCCEEEEEEECCCCCEEECCHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCCCC
DIIFHAAAYKHVPLVESNPLKGLFNNVFSTEIVCKAALEAGANNLVLISTDKAVRPTNVM
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
GASKRLSELVVQAIAEKSKENSIAKKTCFSMVRFGNVLGSSGSVLPLFQEQIDNGGPITL
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCEEE
THPRIIRYFMTISEASQLVIQSKVLAEGGDVFHLDMGKPVSIKSLAEQLILLNGLSIKDN
ECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
KNLEGDIEIKFTGLRPGEKLYEELIIDAESKKTIHPLIYRADERFIPLDIIMPTLEILRR
CCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHEEECCCCEEEHHHHHHHHHHHHH
YLDNEDKINSLLILKELVPEWQTNLI
HCCCCHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]