Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124025559

Identifier: 124025559

GI number: 124025559

Start: 782507

End: 782677

Strand: Reverse

Name: 124025559

Synonym: NATL1_08521

Alternate gene names: NA

Gene position: 782677-782507 (Counterclockwise)

Preceding gene: 124025565

Following gene: 124025558

Centisome position: 41.97

GC content: 36.84

Gene sequence:

>171_bases
ATGAAAAAAGACAACCTGAAGAGAATCATTAAACAGTTTGAAACCTTGCTAGAAGAATTGAAGAGTGAGGTCTATTCTGA
TAAAGATGCCTACGTACATCCGTGGGATGAACATATGAAAAACACCCCTAGGATAATCAATACAGAAGATGACGATGGAT
ATGCAGATTAG

Upstream 100 bases:

>100_bases
ATCTGTTAGAAGTTGATAAGTTAAATAAGTTTTATCTATAACTCGAATAAAATTCTTGTTATAGTAAGTAATGCAACATT
TTCAATCAAAAGCAATATAA

Downstream 100 bases:

>100_bases
TTAGCTTTAGATGACTTAAAGCTGAGGTGAGGGAAAACGTAATTTTTTCTTTTCTTCGTTTTTTTGGTACTTTTACCTAT
TGCTACAAAAGAATATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MKKDNLKRIIKQFETLLEELKSEVYSDKDAYVHPWDEHMKNTPRIINTEDDDGYAD

Sequences:

>Translated_56_residues
MKKDNLKRIIKQFETLLEELKSEVYSDKDAYVHPWDEHMKNTPRIINTEDDDGYAD
>Mature_56_residues
MKKDNLKRIIKQFETLLEELKSEVYSDKDAYVHPWDEHMKNTPRIINTEDDDGYAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6728; Mature: 6728

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDNLKRIIKQFETLLEELKSEVYSDKDAYVHPWDEHMKNTPRIINTEDDDGYAD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKDNLKRIIKQFETLLEELKSEVYSDKDAYVHPWDEHMKNTPRIINTEDDDGYAD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA