| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025537
Identifier: 124025537
GI number: 124025537
Start: 763070
End: 763606
Strand: Reverse
Name: 124025537
Synonym: NATL1_08301
Alternate gene names: NA
Gene position: 763606-763070 (Counterclockwise)
Preceding gene: 124025538
Following gene: 124025536
Centisome position: 40.95
GC content: 38.18
Gene sequence:
>537_bases ATGTCAACAACAAATAAAAACGACGAAGTACCGACTCTTTTAGTTAAAGATTCTCAAGGTTCAGATCTCCTGTGTTTTCT TGAACAAGTAGTACCTCTTGAAGGCAATGAATATGCCCTGTTAACTCCAGTAGATACTCCTGTATCTCTATTTCAATTGA TTGACGATCAAGATCCCAAGCTAATAGAAACAATTGAAAAGAATGAGCCAATACTTGAAGTAGCTGATGTTGTTCTTCAA GAACACGATCTTAGACTTATTCGCTCAGCTATCACACTTACAGTCTCAGGCGAATTAGATGAGCCTGAACCAGAAGAAAT TGAGGAAGAAGACATTGATGACGAGTCAGAAACCTACGAGCTACTTGTCAATTTTAGAGTTGAAAGTAATGAGTATGGTC TATACATTCCTCTTGACCCTTTCTTCATAGTCGGAAAGCTCGAAGATGGAGAAGTAAAGCTTGTTGAAGGTGAAGAGTTT GACAAGATACAATCAGGAATTGAAGCTGAACTTGAGGGAAGGGGATTATCAGAATAA
Upstream 100 bases:
>100_bases CTTATTGAGGGACCTGATCTGGATGACTCAAATTAAATTTTGAATATGATGTAAAAACATAATCAAATAAAACTAGACAC AGATTAATAAGAACTCAACT
Downstream 100 bases:
>100_bases ACATTAAAGAATTACTTATTCCAAATTGGAAGGTAAACGATAAAATTTCAAAGATCTCGATAAATGATTTATCATCGAAA AACGTCAAAGCACTAATACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSTTNKNDEVPTLLVKDSQGSDLLCFLEQVVPLEGNEYALLTPVDTPVSLFQLIDDQDPKLIETIEKNEPILEVADVVLQ EHDLRLIRSAITLTVSGELDEPEPEEIEEEDIDDESETYELLVNFRVESNEYGLYIPLDPFFIVGKLEDGEVKLVEGEEF DKIQSGIEAELEGRGLSE
Sequences:
>Translated_178_residues MSTTNKNDEVPTLLVKDSQGSDLLCFLEQVVPLEGNEYALLTPVDTPVSLFQLIDDQDPKLIETIEKNEPILEVADVVLQ EHDLRLIRSAITLTVSGELDEPEPEEIEEEDIDDESETYELLVNFRVESNEYGLYIPLDPFFIVGKLEDGEVKLVEGEEF DKIQSGIEAELEGRGLSE >Mature_177_residues STTNKNDEVPTLLVKDSQGSDLLCFLEQVVPLEGNEYALLTPVDTPVSLFQLIDDQDPKLIETIEKNEPILEVADVVLQE HDLRLIRSAITLTVSGELDEPEPEEIEEEDIDDESETYELLVNFRVESNEYGLYIPLDPFFIVGKLEDGEVKLVEGEEFD KIQSGIEAELEGRGLSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20025; Mature: 19894
Theoretical pI: Translated: 3.59; Mature: 3.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTNKNDEVPTLLVKDSQGSDLLCFLEQVVPLEGNEYALLTPVDTPVSLFQLIDDQDPK CCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCH LIETIEKNEPILEVADVVLQEHDLRLIRSAITLTVSGELDEPEPEEIEEEDIDDESETYE HHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCEEE LLVNFRVESNEYGLYIPLDPFFIVGKLEDGEVKLVEGEEFDKIQSGIEAELEGRGLSE EEEEEEEECCCCEEEEECCCEEEEEEECCCCEEEECCCCHHHHHCCCCEEECCCCCCC >Mature Secondary Structure STTNKNDEVPTLLVKDSQGSDLLCFLEQVVPLEGNEYALLTPVDTPVSLFQLIDDQDPK CCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCH LIETIEKNEPILEVADVVLQEHDLRLIRSAITLTVSGELDEPEPEEIEEEDIDDESETYE HHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCEEE LLVNFRVESNEYGLYIPLDPFFIVGKLEDGEVKLVEGEEFDKIQSGIEAELEGRGLSE EEEEEEEECCCCEEEEECCCEEEEEEECCCCEEEECCCCHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA