| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025531
Identifier: 124025531
GI number: 124025531
Start: 757741
End: 758226
Strand: Reverse
Name: 124025531
Synonym: NATL1_08241
Alternate gene names: NA
Gene position: 758226-757741 (Counterclockwise)
Preceding gene: 124025532
Following gene: 124025530
Centisome position: 40.66
GC content: 25.93
Gene sequence:
>486_bases GTGATTATCATATCCTTTACTTTTATACTTTTATATATTTTGTTTTCTATATCGATAGAAGATATAAACACAATGCTAAT AAGTGAAAGTAAATTAATAATCTTTGCCCTATCAGGTATTATTTACTTGGCATTTCTAGGCTTGTCAAACGAGAAAATAG ATATTAAAGACTTAATAACAAATAATTCTTTATCAATGATCATTATCTTCATAATAATGTATTCAATAAGTTATATAAGC TATAAAATCTTTGGAATAAATTCATTAGGCCTGGGTGATATAAAACTCTCTTCCATTAGTACAATATGGCTTGGTATTGA ATTCAGCTTTTTGTCATTGTGTATTTCATTTTTACTTTCAGCTATATATAGTTTACATGGAAAAATTACTAAAAGATTTA TACCATTTGAACAGTATCCATTTGCGCCTTTCCTATCAATTGGGATATTTTCTTCATGGATTATAGATAAGATTCAAACT TTGTAA
Upstream 100 bases:
>100_bases ATTCATAAAATGATAGAAGAGAAAAAGGCTTCAGGATAACAAATTCAATCAATCAAAGCTAATAATATCTATTATTAATA GATAAAGTAAATAATTAATA
Downstream 100 bases:
>100_bases TCCCTATAAGGGGACTCAAGGTATTAAATTAATTTCAATCACAAAATAGCAGTGTCATTATTCGACTGGTTTGCTGATAG AAGGAAAGGCCAATTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MIIISFTFILLYILFSISIEDINTMLISESKLIIFALSGIIYLAFLGLSNEKIDIKDLITNNSLSMIIIFIIMYSISYIS YKIFGINSLGLGDIKLSSISTIWLGIEFSFLSLCISFLLSAIYSLHGKITKRFIPFEQYPFAPFLSIGIFSSWIIDKIQT L
Sequences:
>Translated_161_residues MIIISFTFILLYILFSISIEDINTMLISESKLIIFALSGIIYLAFLGLSNEKIDIKDLITNNSLSMIIIFIIMYSISYIS YKIFGINSLGLGDIKLSSISTIWLGIEFSFLSLCISFLLSAIYSLHGKITKRFIPFEQYPFAPFLSIGIFSSWIIDKIQT L >Mature_161_residues MIIISFTFILLYILFSISIEDINTMLISESKLIIFALSGIIYLAFLGLSNEKIDIKDLITNNSLSMIIIFIIMYSISYIS YKIFGINSLGLGDIKLSSISTIWLGIEFSFLSLCISFLLSAIYSLHGKITKRFIPFEQYPFAPFLSIGIFSSWIIDKIQT L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18253; Mature: 18253
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIISFTFILLYILFSISIEDINTMLISESKLIIFALSGIIYLAFLGLSNEKIDIKDLIT CEEEHHHHHHHHHHHHCCHHHHHHEEECCCCCEEHHHHHHHHHHHHCCCCCCEEHHHHHC NNSLSMIIIFIIMYSISYISYKIFGINSLGLGDIKLSSISTIWLGIEFSFLSLCISFLLS CCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEECCCEEEEEEHHHHHHHHHHHHHHH AIYSLHGKITKRFIPFEQYPFAPFLSIGIFSSWIIDKIQTL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIIISFTFILLYILFSISIEDINTMLISESKLIIFALSGIIYLAFLGLSNEKIDIKDLIT CEEEHHHHHHHHHHHHCCHHHHHHEEECCCCCEEHHHHHHHHHHHHCCCCCCEEHHHHHC NNSLSMIIIFIIMYSISYISYKIFGINSLGLGDIKLSSISTIWLGIEFSFLSLCISFLLS CCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEECCCEEEEEEHHHHHHHHHHHHHHH AIYSLHGKITKRFIPFEQYPFAPFLSIGIFSSWIIDKIQTL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA