| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025509
Identifier: 124025509
GI number: 124025509
Start: 738161
End: 739348
Strand: Direct
Name: 124025509
Synonym: NATL1_08021
Alternate gene names: NA
Gene position: 738161-739348 (Clockwise)
Preceding gene: 124025508
Following gene: 124025510
Centisome position: 39.59
GC content: 31.31
Gene sequence:
>1188_bases ATGTTAACTAACCTATTATTATTCTCTAGATTTCAAAAATTAGTAGAAAGTAAATGGAAAATAATTCCATTATTAGATAG ATGGATACTTTTTGAATTATTGCCGCCTTTATTTTTTTCAATTGCGGCTTTTACCGTCGTTTCTCTTTCAGTAGGAGTGA TTTTTGATCTGATTAGAAAAATAGTTGAGATTGGTCTTCCTTTTTCTGTAGCTATTCAGATTCTATTGCTAAAGCTACCA AGTTTCATTGTTATTTCTTTCCCCATGGCAATGTTACTTTCAACTTTATTGGCTTATGGGAGTCTTAATGATAACAGTGA AATTAAGGCATTAAAAAGTATTGGGATATCAGTTTATAGAATAATTTTGCCAGGATTGATCTTGTCAATAGCTATGTCCT ATATGACCTTCATTTTTAATAATAATATTGTTCCTAATACAAATAAAAATGCTGAAATTATCTTAGCTAATTCTTTAGGT AGATCTTTTGCAAATGAACAGGGCGAAGATATTATATTTTCAAAGAAAGGAGAAATCTTAGATCCATATTCAAGCTATAA AAAAAACGGAGTTACGCATCTATTTTATGCCTGGAAATTTATTGATGGGCAGATGTTGGATGTCACAGTAATTGATTTTT CAAAATTAGGTTTTACTCAAATGCTTAAGGCGAAAAAAGGTATTTGGAATAGTGATAAAAACAATTGGGAGTTTTTTGAA GGAGATATTTTGACACTTAGTCCTGATGGAAGTAATACAAGGACTAAATTCTTGAGTTTTTTATATCCATTAGGGACTGA ACTAACGAATATTGCACAATTGCCAAAAGATTCAAATGATATGAATCTTGGAGAAGCGAATACGGCTATGAAGTTATACC AAAGTAGTGGCAATATTAAAGAAGCAAGAAGGATGAAAGTAAGAATTCAAGAAAAATTTACTTTGCCAATCGCTTGTTCA GTATTTGCCTTAATTGGTTGTAGTTTTGGAGTGATGCAAAAAAGTGGAGGAGGTAGAAGTCAAAGTTTTGGATTAAGCAT TATTTTGATACTTATCTATTACATTTTGAGTTTTAGTTTTAGCTCTCTTGGAGTCAAAGGGATAATAAATCCTTTCTTTG CTGCTTGGTCTCCTGTTTTTTTGTCTATGTTAGGGGGAGGTTTTTTGTTAAAACAGGCAGGCAAATGA
Upstream 100 bases:
>100_bases TAATCAAGGCGAAATCCTTGCTGATGGAACGTCTGATCAACTAACAAAGAATCAAATTGTTAAAGATAGCTATCTGGGGA ATTCATTCGATTAATTAGCT
Downstream 100 bases:
>100_bases TCTGGTCTTTCTAAATAATCTCTAATAGCTTTTATCAATGGTTGATTTTCAGTTAAATAATTTTTCTTTTGACCCTGTTG TTTCCCTTGGGTTAGCAGCT
Product: putative permease
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; YjgP/YjgQ Family Protein; Permease YjgP/YjgQ Family; YjgP/YjgQ Permease; Unclassified ABC-Type Transport System Permease; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Family Membrane Protein
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MLTNLLLFSRFQKLVESKWKIIPLLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRKIVEIGLPFSVAIQILLLKLP SFIVISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRIILPGLILSIAMSYMTFIFNNNIVPNTNKNAEIILANSLG RSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYAWKFIDGQMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFE GDILTLSPDGSNTRTKFLSFLYPLGTELTNIAQLPKDSNDMNLGEANTAMKLYQSSGNIKEARRMKVRIQEKFTLPIACS VFALIGCSFGVMQKSGGGRSQSFGLSIILILIYYILSFSFSSLGVKGIINPFFAAWSPVFLSMLGGGFLLKQAGK
Sequences:
>Translated_395_residues MLTNLLLFSRFQKLVESKWKIIPLLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRKIVEIGLPFSVAIQILLLKLP SFIVISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRIILPGLILSIAMSYMTFIFNNNIVPNTNKNAEIILANSLG RSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYAWKFIDGQMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFE GDILTLSPDGSNTRTKFLSFLYPLGTELTNIAQLPKDSNDMNLGEANTAMKLYQSSGNIKEARRMKVRIQEKFTLPIACS VFALIGCSFGVMQKSGGGRSQSFGLSIILILIYYILSFSFSSLGVKGIINPFFAAWSPVFLSMLGGGFLLKQAGK >Mature_395_residues MLTNLLLFSRFQKLVESKWKIIPLLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRKIVEIGLPFSVAIQILLLKLP SFIVISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRIILPGLILSIAMSYMTFIFNNNIVPNTNKNAEIILANSLG RSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYAWKFIDGQMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFE GDILTLSPDGSNTRTKFLSFLYPLGTELTNIAQLPKDSNDMNLGEANTAMKLYQSSGNIKEARRMKVRIQEKFTLPIACS VFALIGCSFGVMQKSGGGRSQSFGLSIILILIYYILSFSFSSLGVKGIINPFFAAWSPVFLSMLGGGFLLKQAGK
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44021; Mature: 44021
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNLLLFSRFQKLVESKWKIIPLLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRK CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVEIGLPFSVAIQILLLKLPSFIVISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH IILPGLILSIAMSYMTFIFNNNIVPNTNKNAEIILANSLGRSFANEQGEDIIFSKKGEIL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHCCCCCCEEEEECCCCCC DPYSSYKKNGVTHLFYAWKFIDGQMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFE CCHHHHHHCCCEEEEEEEHCCCCCEEEEEEECHHHCCHHHHHHHHCCCCCCCCCCCEEEE GDILTLSPDGSNTRTKFLSFLYPLGTELTNIAQLPKDSNDMNLGEANTAMKLYQSSGNIK CCEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHH EARRMKVRIQEKFTLPIACSVFALIGCSFGVMQKSGGGRSQSFGLSIILILIYYILSFSF HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH SSLGVKGIINPFFAAWSPVFLSMLGGGFLLKQAGK HHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MLTNLLLFSRFQKLVESKWKIIPLLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRK CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVEIGLPFSVAIQILLLKLPSFIVISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH IILPGLILSIAMSYMTFIFNNNIVPNTNKNAEIILANSLGRSFANEQGEDIIFSKKGEIL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHCCCCCCEEEEECCCCCC DPYSSYKKNGVTHLFYAWKFIDGQMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFE CCHHHHHHCCCEEEEEEEHCCCCCEEEEEEECHHHCCHHHHHHHHCCCCCCCCCCCEEEE GDILTLSPDGSNTRTKFLSFLYPLGTELTNIAQLPKDSNDMNLGEANTAMKLYQSSGNIK CCEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHH EARRMKVRIQEKFTLPIACSVFALIGCSFGVMQKSGGGRSQSFGLSIILILIYYILSFSF HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH SSLGVKGIINPFFAAWSPVFLSMLGGGFLLKQAGK HHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA