Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124025506

Identifier: 124025506

GI number: 124025506

Start: 735254

End: 735634

Strand: Direct

Name: 124025506

Synonym: NATL1_07991

Alternate gene names: NA

Gene position: 735254-735634 (Clockwise)

Preceding gene: 124025505

Following gene: 124025507

Centisome position: 39.43

GC content: 33.33

Gene sequence:

>381_bases
ATGAACCCTATGGATAATGAAGATAATTTATTTATAAATGATGCTCGTTTTGAAATAGGAATGAAATTATTTAATTCTTG
TCAGTGGTACAAATCCCATGATGTTTTTGAAGAGATATGGCATGAGACTGGAGGTCCTGAAAGGCAGTTGTTACAGGGAA
TATTGCAAGTAGCTGTTGCACAAGTTCATTTAGAAAATAGCAATATAAATGGGGCGACCATACTTTATGGAGAAGCATTA
GGTAGATTGAAAAAATTTCAATTATCTAATTTAGGATTAGATATTGAAGGACTTTCTAAATGTGTTTCAAAAAGATTGGA
ATTGCTACAAGTTGGTAAGGACCTAGCTTGTTCCTCCATTCCCGTTCTCAATTTTCTTTGA

Upstream 100 bases:

>100_bases
AAAGAGCTCTTGAATACATTGGACCAGGTGAGATGTTGGAAGTTACTCCTGAATCAATAAGGCTTAGAAAAATTAAAGCA
AAGAAAAATTTGTAAAGATA

Downstream 100 bases:

>100_bases
AAACTTTGTTAAGCCTCTCACAGTTTTTCTGTTGAAAGAGAGATGATTTCATATTATTTTTCTTGTTGTACTTTTTTGAT
TTTCTTCGATTTTAAGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MNPMDNEDNLFINDARFEIGMKLFNSCQWYKSHDVFEEIWHETGGPERQLLQGILQVAVAQVHLENSNINGATILYGEAL
GRLKKFQLSNLGLDIEGLSKCVSKRLELLQVGKDLACSSIPVLNFL

Sequences:

>Translated_126_residues
MNPMDNEDNLFINDARFEIGMKLFNSCQWYKSHDVFEEIWHETGGPERQLLQGILQVAVAQVHLENSNINGATILYGEAL
GRLKKFQLSNLGLDIEGLSKCVSKRLELLQVGKDLACSSIPVLNFL
>Mature_126_residues
MNPMDNEDNLFINDARFEIGMKLFNSCQWYKSHDVFEEIWHETGGPERQLLQGILQVAVAQVHLENSNINGATILYGEAL
GRLKKFQLSNLGLDIEGLSKCVSKRLELLQVGKDLACSSIPVLNFL

Specific function: Unknown

COG id: COG1547

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14192; Mature: 14192

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPMDNEDNLFINDARFEIGMKLFNSCQWYKSHDVFEEIWHETGGPERQLLQGILQVAVA
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QVHLENSNINGATILYGEALGRLKKFQLSNLGLDIEGLSKCVSKRLELLQVGKDLACSSI
HHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCCCC
PVLNFL
CHHCCC
>Mature Secondary Structure
MNPMDNEDNLFINDARFEIGMKLFNSCQWYKSHDVFEEIWHETGGPERQLLQGILQVAVA
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QVHLENSNINGATILYGEALGRLKKFQLSNLGLDIEGLSKCVSKRLELLQVGKDLACSSI
HHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCCCC
PVLNFL
CHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA