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The map label for this gene is yibD [H]

Identifier: 124025495

GI number: 124025495

Start: 719636

End: 720568

Strand: Direct

Name: yibD [H]

Synonym: NATL1_07881

Alternate gene names: 124025495

Gene position: 719636-720568 (Clockwise)

Preceding gene: 124025494

Following gene: 124025496

Centisome position: 38.59

GC content: 33.65

Gene sequence:

>933_bases
ATGTTAACTAGCGTTGTTATACCGACTTACAACAGACTTCCGATACTAAGAAAGTGTCTAGATGCATTAGAAAATCAAAT
TTTGAATGTTGAAATTCATTCTTTTGAAATTGTAATAGTTGATGATGGATCAACAGATGGGACAGTTGATTGGCTAAGAA
ACAATATTGAGACCTATCCTCATTTAAGGCTTTTTGAACAATCCCATGGAGGGCCTGCTCTAGGAAGAAATCTTGGAGTT
GAAAAGTCAAAAGGTGAATTAATTGTTTTTATAGATAGTGATCTAGTTGTTGATAAATTTTTCCTACGGAACCATATTGA
TTCTTTGTTCAGAGCCTGGAAAAAACTTGGGAATAGAAAATGTTTTACCTATGGATCTGTCATAAATACTTCTAATTTTA
GTAATCCAAATTCTGAACCTTTTAAACTTCAAGACTTGTCTTGGGCTTACTTCGCTACTGGAAATGTTGCTATTGATAAA
AAGCTTTTAGAAAAATCAGGTCTTTTTGACAACTCTTTTCGACTATATGGTTGGGAAGATTTGGAACTAGGAGAAAGACT
AAGAAATATGGGCGTTAAACTTATTAAATGTCCAAGAGCTATTGGATATCATTGGCATCCTGCTTTAGCTCTTGATCAAA
TTCCTCAATTGATTCGAATTGAAAAAGAGAGAGCAAAGATGGGATTAGTCTTTTATCGTAAGCACCCAACTTTGAGAGTG
AAATTTATAATTCAATACACTTTGTTTCATCGTTGCCTTTGGGAATTTTTAACTTTTGGTGGACTTATTAATACGAAGTC
ACTAAGACCTCTTTTGGCTTTTTTAATTAAGAATGGTCAATCTGGTTTGGCTATGGAATTGTTAAGACTTCCTCTCAATT
TGATTGGAGTGAGACAAATTTTTAGAGAAGCATCATTAATTGGACTCCGATGA

Upstream 100 bases:

>100_bases
GCTGACTAATAAATTGAAATGCAATTCTAATAATATTTTTTTTAAATCCTTTAATTTAAAGTTTTTGAAGAAAAAAATTG
ATTCTATTTTTTAATTTAGG

Downstream 100 bases:

>100_bases
GCCATGGTTTGTTAGATTAGGATTGCAATCTAAAACCGCACACCTAACTGTTTCGGGTGATAAATAAATAGTGATTCTTT
AATCATTATTTAAGTTATCC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MLTSVVIPTYNRLPILRKCLDALENQILNVEIHSFEIVIVDDGSTDGTVDWLRNNIETYPHLRLFEQSHGGPALGRNLGV
EKSKGELIVFIDSDLVVDKFFLRNHIDSLFRAWKKLGNRKCFTYGSVINTSNFSNPNSEPFKLQDLSWAYFATGNVAIDK
KLLEKSGLFDNSFRLYGWEDLELGERLRNMGVKLIKCPRAIGYHWHPALALDQIPQLIRIEKERAKMGLVFYRKHPTLRV
KFIIQYTLFHRCLWEFLTFGGLINTKSLRPLLAFLIKNGQSGLAMELLRLPLNLIGVRQIFREASLIGLR

Sequences:

>Translated_310_residues
MLTSVVIPTYNRLPILRKCLDALENQILNVEIHSFEIVIVDDGSTDGTVDWLRNNIETYPHLRLFEQSHGGPALGRNLGV
EKSKGELIVFIDSDLVVDKFFLRNHIDSLFRAWKKLGNRKCFTYGSVINTSNFSNPNSEPFKLQDLSWAYFATGNVAIDK
KLLEKSGLFDNSFRLYGWEDLELGERLRNMGVKLIKCPRAIGYHWHPALALDQIPQLIRIEKERAKMGLVFYRKHPTLRV
KFIIQYTLFHRCLWEFLTFGGLINTKSLRPLLAFLIKNGQSGLAMELLRLPLNLIGVRQIFREASLIGLR
>Mature_310_residues
MLTSVVIPTYNRLPILRKCLDALENQILNVEIHSFEIVIVDDGSTDGTVDWLRNNIETYPHLRLFEQSHGGPALGRNLGV
EKSKGELIVFIDSDLVVDKFFLRNHIDSLFRAWKKLGNRKCFTYGSVINTSNFSNPNSEPFKLQDLSWAYFATGNVAIDK
KLLEKSGLFDNSFRLYGWEDLELGERLRNMGVKLIKCPRAIGYHWHPALALDQIPQLIRIEKERAKMGLVFYRKHPTLRV
KFIIQYTLFHRCLWEFLTFGGLINTKSLRPLLAFLIKNGQSGLAMELLRLPLNLIGVRQIFREASLIGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=91, Percent_Identity=38.4615384615385, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35687; Mature: 35687

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSVVIPTYNRLPILRKCLDALENQILNVEIHSFEIVIVDDGSTDGTVDWLRNNIETYP
CCCEEECCCCCCCHHHHHHHHHHHHCEEEEEEEEEEEEEEECCCCCCHHHHHHCCCCCCC
HLRLFEQSHGGPALGRNLGVEKSKGELIVFIDSDLVVDKFFLRNHIDSLFRAWKKLGNRK
CEEEEECCCCCCCHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCE
CFTYGSVINTSNFSNPNSEPFKLQDLSWAYFATGNVAIDKKLLEKSGLFDNSFRLYGWED
EEEECCEEECCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCH
LELGERLRNMGVKLIKCPRAIGYHWHPALALDQIPQLIRIEKERAKMGLVFYRKHPTLRV
HHHHHHHHHCCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEE
KFIIQYTLFHRCLWEFLTFGGLINTKSLRPLLAFLIKNGQSGLAMELLRLPLNLIGVRQI
EHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH
FREASLIGLR
HHHHHHCCCC
>Mature Secondary Structure
MLTSVVIPTYNRLPILRKCLDALENQILNVEIHSFEIVIVDDGSTDGTVDWLRNNIETYP
CCCEEECCCCCCCHHHHHHHHHHHHCEEEEEEEEEEEEEEECCCCCCHHHHHHCCCCCCC
HLRLFEQSHGGPALGRNLGVEKSKGELIVFIDSDLVVDKFFLRNHIDSLFRAWKKLGNRK
CEEEEECCCCCCCHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCE
CFTYGSVINTSNFSNPNSEPFKLQDLSWAYFATGNVAIDKKLLEKSGLFDNSFRLYGWED
EEEECCEEECCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCH
LELGERLRNMGVKLIKCPRAIGYHWHPALALDQIPQLIRIEKERAKMGLVFYRKHPTLRV
HHHHHHHHHCCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEE
KFIIQYTLFHRCLWEFLTFGGLINTKSLRPLLAFLIKNGQSGLAMELLRLPLNLIGVRQI
EHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH
FREASLIGLR
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]