| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is yueF [H]
Identifier: 124025473
GI number: 124025473
Start: 699834
End: 700910
Strand: Reverse
Name: yueF [H]
Synonym: NATL1_07661
Alternate gene names: 124025473
Gene position: 700910-699834 (Counterclockwise)
Preceding gene: 124025474
Following gene: 124025471
Centisome position: 37.59
GC content: 31.38
Gene sequence:
>1077_bases TTGAAACAGACTAGCTTTCTATCAATCACAGCTTTAATTATTTCTGTATTGATTTTATGGAGTTTAAAAGAAATAGTCAT ACTATTTTTTGCTTCAATAATTATAGCTATGGCTCTTTGTACAATTACTGGTAAAATAAGAGATTTTCTTCAAATCCCTA GGTGGGGATCATTAATAATAACAATAATATCTATACTTCTTATTTCAAGTATTTCAATAGTAATAATAATACCGCAATTT ACCAGCGAGTTTCAAGAGTTAATCAATCAAATACCTTCAGCAGCAAGCAAACTATGGGAGCTCTCAATAAAAATCTTTTT AAATTTCTCTGAGCTTGTATATAAAGACAATATTCCTAATCTAGCCGATAAAACAATCTTGACCAATAAGCTTAGCATGA TTCCAGATGGTGCAAGTCTTGCCAGCACTGTAACAGATAGCATCACGAAATTACTTAGTTTAGTAAGTAATGTTGGAATA GGAATTATTCAATTAATTTTTATATTATCAGTTGGTTTAATGATAACTTTACAGCCTCAATCATACAGAGAAGTTGCTAT ATTACTAGTCCCATCATTTTACAGAAGGCGTGCAAGAACAATTTTATTGAGATGCGGAAATGCCTTAAGTAGTTGGATGT CTGGAGTATTACTAAGCTCAATATGTGTAGCCTTACTAGCCGCCATTGGACTGTATTTACTAGGAATAAAACTGGTAATA GCTAATGCTTTAATAGCTGGTGTTTTAAATATTATCCCAAATGTAGGTCCAACAATAAGCACTATTTTCCCACTTTCCGT TGCACTGCTAGATACTCCTTGGAAATCATTTGCTGTTCTTGGCTTATATGTAGTAATTCAAAATATTGAGAGCTATGTAA TAACTCCTTCAATAATGCACAAACAAGTCAAATTACTGCCAGGGCTGACAATTACTGCCCAATTTATTTTTACTATTATT TTTGGTCCACTTGGATTGTTGTTAGCAATTCCAATGGCAGTAGTAATACAAGTATTTGTTAAAGAAATAATTATTAATGA CATACTAGAAAAAAATATTTTTTCAACAAAAATCTAG
Upstream 100 bases:
>100_bases TAAGTCTACCTATAGTTGGAATTCAGAAGAAGCATTCGAGAGATTTATGCGTTTCGCTTCAAGGTATGCGAATTCTCTAT CTAAGAATTAATTACTTAAA
Downstream 100 bases:
>100_bases ATTTAAAAGTGGGGAGGATATGAATATTAATCAATAAGAAATTAATCCAAGTACAAATGGAATTTATAGAAATTTCAGAC AAATTTATTCTTTCCAGTTC
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKQTSFLSITALIISVLILWSLKEIVILFFASIIIAMALCTITGKIRDFLQIPRWGSLIITIISILLISSISIVIIIPQF TSEFQELINQIPSAASKLWELSIKIFLNFSELVYKDNIPNLADKTILTNKLSMIPDGASLASTVTDSITKLLSLVSNVGI GIIQLIFILSVGLMITLQPQSYREVAILLVPSFYRRRARTILLRCGNALSSWMSGVLLSSICVALLAAIGLYLLGIKLVI ANALIAGVLNIIPNVGPTISTIFPLSVALLDTPWKSFAVLGLYVVIQNIESYVITPSIMHKQVKLLPGLTITAQFIFTII FGPLGLLLAIPMAVVIQVFVKEIIINDILEKNIFSTKI
Sequences:
>Translated_358_residues MKQTSFLSITALIISVLILWSLKEIVILFFASIIIAMALCTITGKIRDFLQIPRWGSLIITIISILLISSISIVIIIPQF TSEFQELINQIPSAASKLWELSIKIFLNFSELVYKDNIPNLADKTILTNKLSMIPDGASLASTVTDSITKLLSLVSNVGI GIIQLIFILSVGLMITLQPQSYREVAILLVPSFYRRRARTILLRCGNALSSWMSGVLLSSICVALLAAIGLYLLGIKLVI ANALIAGVLNIIPNVGPTISTIFPLSVALLDTPWKSFAVLGLYVVIQNIESYVITPSIMHKQVKLLPGLTITAQFIFTII FGPLGLLLAIPMAVVIQVFVKEIIINDILEKNIFSTKI >Mature_358_residues MKQTSFLSITALIISVLILWSLKEIVILFFASIIIAMALCTITGKIRDFLQIPRWGSLIITIISILLISSISIVIIIPQF TSEFQELINQIPSAASKLWELSIKIFLNFSELVYKDNIPNLADKTILTNKLSMIPDGASLASTVTDSITKLLSLVSNVGI GIIQLIFILSVGLMITLQPQSYREVAILLVPSFYRRRARTILLRCGNALSSWMSGVLLSSICVALLAAIGLYLLGIKLVI ANALIAGVLNIIPNVGPTISTIFPLSVALLDTPWKSFAVLGLYVVIQNIESYVITPSIMHKQVKLLPGLTITAQFIFTII FGPLGLLLAIPMAVVIQVFVKEIIINDILEKNIFSTKI
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 39204; Mature: 39204
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTSFLSITALIISVLILWSLKEIVILFFASIIIAMALCTITGKIRDFLQIPRWGSLII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TIISILLISSISIVIIIPQFTSEFQELINQIPSAASKLWELSIKIFLNFSELVYKDNIPN HHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHCCCCCC LADKTILTNKLSMIPDGASLASTVTDSITKLLSLVSNVGIGIIQLIFILSVGLMITLQPQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCC SYREVAILLVPSFYRRRARTILLRCGNALSSWMSGVLLSSICVALLAAIGLYLLGIKLVI CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANALIAGVLNIIPNVGPTISTIFPLSVALLDTPWKSFAVLGLYVVIQNIESYVITPSIMH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH KQVKLLPGLTITAQFIFTIIFGPLGLLLAIPMAVVIQVFVKEIIINDILEKNIFSTKI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKQTSFLSITALIISVLILWSLKEIVILFFASIIIAMALCTITGKIRDFLQIPRWGSLII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TIISILLISSISIVIIIPQFTSEFQELINQIPSAASKLWELSIKIFLNFSELVYKDNIPN HHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHCCCCCC LADKTILTNKLSMIPDGASLASTVTDSITKLLSLVSNVGIGIIQLIFILSVGLMITLQPQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCC SYREVAILLVPSFYRRRARTILLRCGNALSSWMSGVLLSSICVALLAAIGLYLLGIKLVI CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANALIAGVLNIIPNVGPTISTIFPLSVALLDTPWKSFAVLGLYVVIQNIESYVITPSIMH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH KQVKLLPGLTITAQFIFTIIFGPLGLLLAIPMAVVIQVFVKEIIINDILEKNIFSTKI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]