| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025466
Identifier: 124025466
GI number: 124025466
Start: 695172
End: 695567
Strand: Reverse
Name: 124025466
Synonym: NATL1_07591
Alternate gene names: NA
Gene position: 695567-695172 (Counterclockwise)
Preceding gene: 124025467
Following gene: 124025465
Centisome position: 37.3
GC content: 28.03
Gene sequence:
>396_bases ATGCCCTCCATAAGAAAAAGGATTGGCTATCTTCCATCAATTAATGCTCAAAAGACAATATCTAAAATTGCAAATAAAGA AAAGCTTAGCCAATCAAAAGTGGTAGGGATATTAGTAGAAGAAGCATTGATGGCGAGAATCGTCTTCGATCTTAAAAATT CTAATGATCTAATTGAAAATAACCTTTATTGCAAAGAAAATAATATAGATAAAACATCGTTCAACTATAACGATCTTGAT GAATTGATCTCAGATAAAGGTATAACTTACAAAACAAAAAAGTACAGCTATACTTCAGATCATATTTTAACTAAATCCAA AGAAAATTTCAACAAAGAGTTATTTGAGCAGTTTAAAAAATTTCTCCTGTTTCAAAAAATGATACAAGATAAATAA
Upstream 100 bases:
>100_bases CTGATTGGATTTTTTAAACTTACGAGGTCAAGAATTACATAAAATATTTGAAATTCAACCAAAAGGTAAAGTAAATTAAA TTTCATCTAAATATATATGT
Downstream 100 bases:
>100_bases TAAGAATTAATTTTTTAAATGGTTATATTAAATCTATCTATCGCTAAGAAATTATAAAAAAGCTAGGGATTCTAAAGGAT GCAGAGATCAACAAAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MPSIRKRIGYLPSINAQKTISKIANKEKLSQSKVVGILVEEALMARIVFDLKNSNDLIENNLYCKENNIDKTSFNYNDLD ELISDKGITYKTKKYSYTSDHILTKSKENFNKELFEQFKKFLLFQKMIQDK
Sequences:
>Translated_131_residues MPSIRKRIGYLPSINAQKTISKIANKEKLSQSKVVGILVEEALMARIVFDLKNSNDLIENNLYCKENNIDKTSFNYNDLD ELISDKGITYKTKKYSYTSDHILTKSKENFNKELFEQFKKFLLFQKMIQDK >Mature_130_residues PSIRKRIGYLPSINAQKTISKIANKEKLSQSKVVGILVEEALMARIVFDLKNSNDLIENNLYCKENNIDKTSFNYNDLDE LISDKGITYKTKKYSYTSDHILTKSKENFNKELFEQFKKFLLFQKMIQDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15339; Mature: 15208
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSIRKRIGYLPSINAQKTISKIANKEKLSQSKVVGILVEEALMARIVFDLKNSNDLIEN CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC NLYCKENNIDKTSFNYNDLDELISDKGITYKTKKYSYTSDHILTKSKENFNKELFEQFKK CCEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHCCCHHHCCHHHHHHHHH FLLFQKMIQDK HHHHHHHHHCC >Mature Secondary Structure PSIRKRIGYLPSINAQKTISKIANKEKLSQSKVVGILVEEALMARIVFDLKNSNDLIEN CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC NLYCKENNIDKTSFNYNDLDELISDKGITYKTKKYSYTSDHILTKSKENFNKELFEQFKK CCEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHCCCHHHCCHHHHHHHHH FLLFQKMIQDK HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA