Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025446
Identifier: 124025446
GI number: 124025446
Start: 680306
End: 681196
Strand: Direct
Name: 124025446
Synonym: NATL1_07391
Alternate gene names: NA
Gene position: 680306-681196 (Clockwise)
Preceding gene: 124025443
Following gene: 124025448
Centisome position: 36.48
GC content: 39.51
Gene sequence:
>891_bases ATGTGTTGGGGCAGTATAGAGGGTAATTTCCAAAAAAATCTGACAGATATCCGAATTGCTATCGCTGGGGATTTACATGG CTCATGGAGTCAGGATGATCTAGATCTGCTTTTAGAACTTAATCCTGATGGTGTTTTATTTGTTGGCGACTTGTCCGATG GTGATTTAAGAATTGTTCGGGGGATAAATAAAATTTCTATACCCACTTCTGTAGTACTGGGAAATCATGATAGGGGTAGA GACGGATCTGGGAATGTTTTACAAGCCCAGTTGGATTTGTTAGGTGAAAAGAATTGTTCATGGAATTTGTCGAAATGGAC ATTAAATGAACTTTCTGTCGTTGGAGCTAGACCTTGCAGTGGTGGGGGAGGGTTTTTTTTAACACCAGAAGTTAAGTCTG TTTTCGGGGAGGTCAGCCTTGATGAATCTGTATTTAGGATTGTTTCTGCCGCCAAGTCTGCACCATTAGATTTTCCTTTA TTAATACTTGCTCATTCTGGACCAGTAGGTCTTGGATCAGAGGCTTCTAGCCTTTGTGGCAGAGATTGGAAATTGCCCTC AATGGATTGGGGGGATAAAGATCTTGGTATCGCAATTGATCAAATTCGTAAATTTAGAGTTCCAGAATTAGTCGTTTTTG GCCACACTCACCATCAATTAAGAATTGGAGGGAATCGAACTAGAAAAACTTTTGCTCAAGATCTATGGGGGACTTCATAT TTAAATGCAGCGTGTGTTCCAAGAAGAGGTATTGATTCTGCAGGTGAGAATTTGTGTCATTTTTCTTGGGTTGAGTTCTC TAATAACAAGCTTGTTCATGTATCCCACAGATGGTTTAGGAATGATGCATCAATTGCCTATAAAGAGGTTTTATTAAACC AAAAAAATTAG
Upstream 100 bases:
>100_bases TTACGCAAAAAATTGATCTCATCAATGAGATTTTTGTTTTTATTTGAGACTGATATATCAGTCTTGTAATAGGAAACAGT AGTAATTAGTTTCCAATTCA
Downstream 100 bases:
>100_bases TATTCACTATATTTTTATTTTTTTCATACCCAATTGTCTTTAACTTTGCTTAGTTGAATCTGCTGGATCCTTGAATTTTC TTTCAGCAATCAAATAAGCA
Product: putative transcripton factor
Products: NA
Alternate protein names: Metallophosphoesterase; Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Transcripton Factor DevT-Like; Transcripton Factor For Heterocyst Differentiation
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MCWGSIEGNFQKNLTDIRIAIAGDLHGSWSQDDLDLLLELNPDGVLFVGDLSDGDLRIVRGINKISIPTSVVLGNHDRGR DGSGNVLQAQLDLLGEKNCSWNLSKWTLNELSVVGARPCSGGGGFFLTPEVKSVFGEVSLDESVFRIVSAAKSAPLDFPL LILAHSGPVGLGSEASSLCGRDWKLPSMDWGDKDLGIAIDQIRKFRVPELVVFGHTHHQLRIGGNRTRKTFAQDLWGTSY LNAACVPRRGIDSAGENLCHFSWVEFSNNKLVHVSHRWFRNDASIAYKEVLLNQKN
Sequences:
>Translated_296_residues MCWGSIEGNFQKNLTDIRIAIAGDLHGSWSQDDLDLLLELNPDGVLFVGDLSDGDLRIVRGINKISIPTSVVLGNHDRGR DGSGNVLQAQLDLLGEKNCSWNLSKWTLNELSVVGARPCSGGGGFFLTPEVKSVFGEVSLDESVFRIVSAAKSAPLDFPL LILAHSGPVGLGSEASSLCGRDWKLPSMDWGDKDLGIAIDQIRKFRVPELVVFGHTHHQLRIGGNRTRKTFAQDLWGTSY LNAACVPRRGIDSAGENLCHFSWVEFSNNKLVHVSHRWFRNDASIAYKEVLLNQKN >Mature_296_residues MCWGSIEGNFQKNLTDIRIAIAGDLHGSWSQDDLDLLLELNPDGVLFVGDLSDGDLRIVRGINKISIPTSVVLGNHDRGR DGSGNVLQAQLDLLGEKNCSWNLSKWTLNELSVVGARPCSGGGGFFLTPEVKSVFGEVSLDESVFRIVSAAKSAPLDFPL LILAHSGPVGLGSEASSLCGRDWKLPSMDWGDKDLGIAIDQIRKFRVPELVVFGHTHHQLRIGGNRTRKTFAQDLWGTSY LNAACVPRRGIDSAGENLCHFSWVEFSNNKLVHVSHRWFRNDASIAYKEVLLNQKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32519; Mature: 32519
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCWGSIEGNFQKNLTDIRIAIAGDLHGSWSQDDLDLLLELNPDGVLFVGDLSDGDLRIVR CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEE GINKISIPTSVVLGNHDRGRDGSGNVLQAQLDLLGEKNCSWNLSKWTLNELSVVGARPCS CCCEECCCEEEEECCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEECCCEEEEECCCCC GGGGFFLTPEVKSVFGEVSLDESVFRIVSAAKSAPLDFPLLILAHSGPVGLGSEASSLCG CCCCEEECCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHCC RDWKLPSMDWGDKDLGIAIDQIRKFRVPELVVFGHTHHQLRIGGNRTRKTFAQDLWGTSY CCCCCCCCCCCCCCCCEEHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHHHHHCCCHH LNAACVPRRGIDSAGENLCHFSWVEFSNNKLVHVSHRWFRNDASIAYKEVLLNQKN CCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MCWGSIEGNFQKNLTDIRIAIAGDLHGSWSQDDLDLLLELNPDGVLFVGDLSDGDLRIVR CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEE GINKISIPTSVVLGNHDRGRDGSGNVLQAQLDLLGEKNCSWNLSKWTLNELSVVGARPCS CCCEECCCEEEEECCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEECCCEEEEECCCCC GGGGFFLTPEVKSVFGEVSLDESVFRIVSAAKSAPLDFPLLILAHSGPVGLGSEASSLCG CCCCEEECCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHCC RDWKLPSMDWGDKDLGIAIDQIRKFRVPELVVFGHTHHQLRIGGNRTRKTFAQDLWGTSY CCCCCCCCCCCCCCCCEEHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHHHHHCCCHH LNAACVPRRGIDSAGENLCHFSWVEFSNNKLVHVSHRWFRNDASIAYKEVLLNQKN CCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA