Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025428
Identifier: 124025428
GI number: 124025428
Start: 665617
End: 666306
Strand: Direct
Name: 124025428
Synonym: NATL1_07211
Alternate gene names: NA
Gene position: 665617-666306 (Clockwise)
Preceding gene: 124025427
Following gene: 124025431
Centisome position: 35.7
GC content: 35.8
Gene sequence:
>690_bases ATGGATCCTGGTAGCAATTCACAATCAAATTCAAACTCACAAGATCCATATTTGATACTTGGAATAAATGAGGGTGCAAG TTTTGATGCTATTCAAGAAGCAAGAGATAAAAAGTTAAAAGAGGTTGGTGATGATCAAATTACTAAAGCAAAAATAGAAG CTGCTTATGATTCATTGCTAATGGTAAGTCTTAAGTCAAGACAACTTGGTAATGCAAGTAACGAGGCAATAAATGCATCA AAGAAAGAAAATGAAGCCAAGAAAGTTGGTGATATAGGACCTGGTTCGCTCCTCACTAGGTTGAAGAATTTAAATCTTCC TAAATACGAGGCTTCAACATCTAACTTTTTACCAAGCTTAGAGTTACCCTCGGGACAAGAATTAAATATACGGATATCTC TTGGAATATTGGCCTTTTTACTAGTTTTAATTGTGCCTTCTGAAAGTGTTGAATTAATACTTTCATTTTCAACAATAGGC TTATTCATTAGTCAGTCTCGTAGAGGAAGACCTTTCTTTTCTTCTGTCATCTGGTGCATTCTTCTGCTTAGCATTGGACT TTTATCAGGTGCATTACTTATGGGGGGTGCCCAATCATTTATTGATAACGCTGGATCATTATCTTCAGACAAATTTGAGG CGATACCTGCAGTATTTTTGCTTTGGTTAGGAGTGGTTTTCCTTGATTAA
Upstream 100 bases:
>100_bases TCAGTTGCTCCGGTTGTTAGTGGTGTTGATCCTGTTTCTCTCTAAGGTAGATTAAAATCTAAAATTAAAGAGAGTTCATA AATCTTTTTTTGAAAAATCT
Downstream 100 bases:
>100_bases TCCTTTAATCGATTAAAGATATCAATTCGTCCTCTTTAACAAGATAAACATTTTTACAGAATTGACATGTTAGTTCTGCT TTCCCATCTTCCTTTATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MDPGSNSQSNSNSQDPYLILGINEGASFDAIQEARDKKLKEVGDDQITKAKIEAAYDSLLMVSLKSRQLGNASNEAINAS KKENEAKKVGDIGPGSLLTRLKNLNLPKYEASTSNFLPSLELPSGQELNIRISLGILAFLLVLIVPSESVELILSFSTIG LFISQSRRGRPFFSSVIWCILLLSIGLLSGALLMGGAQSFIDNAGSLSSDKFEAIPAVFLLWLGVVFLD
Sequences:
>Translated_229_residues MDPGSNSQSNSNSQDPYLILGINEGASFDAIQEARDKKLKEVGDDQITKAKIEAAYDSLLMVSLKSRQLGNASNEAINAS KKENEAKKVGDIGPGSLLTRLKNLNLPKYEASTSNFLPSLELPSGQELNIRISLGILAFLLVLIVPSESVELILSFSTIG LFISQSRRGRPFFSSVIWCILLLSIGLLSGALLMGGAQSFIDNAGSLSSDKFEAIPAVFLLWLGVVFLD >Mature_229_residues MDPGSNSQSNSNSQDPYLILGINEGASFDAIQEARDKKLKEVGDDQITKAKIEAAYDSLLMVSLKSRQLGNASNEAINAS KKENEAKKVGDIGPGSLLTRLKNLNLPKYEASTSNFLPSLELPSGQELNIRISLGILAFLLVLIVPSESVELILSFSTIG LFISQSRRGRPFFSSVIWCILLLSIGLLSGALLMGGAQSFIDNAGSLSSDKFEAIPAVFLLWLGVVFLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24637; Mature: 24637
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPGSNSQSNSNSQDPYLILGINEGASFDAIQEARDKKLKEVGDDQITKAKIEAAYDSLL CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MVSLKSRQLGNASNEAINASKKENEAKKVGDIGPGSLLTRLKNLNLPKYEASTSNFLPSL HHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCC ELPSGQELNIRISLGILAFLLVLIVPSESVELILSFSTIGLFISQSRRGRPFFSSVIWCI CCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH LLLSIGLLSGALLMGGAQSFIDNAGSLSSDKFEAIPAVFLLWLGVVFLD HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDPGSNSQSNSNSQDPYLILGINEGASFDAIQEARDKKLKEVGDDQITKAKIEAAYDSLL CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MVSLKSRQLGNASNEAINASKKENEAKKVGDIGPGSLLTRLKNLNLPKYEASTSNFLPSL HHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCC ELPSGQELNIRISLGILAFLLVLIVPSESVELILSFSTIGLFISQSRRGRPFFSSVIWCI CCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH LLLSIGLLSGALLMGGAQSFIDNAGSLSSDKFEAIPAVFLLWLGVVFLD HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA