Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
---|---|
Accession | NC_008819 |
Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124025426
Identifier: 124025426
GI number: 124025426
Start: 663174
End: 663857
Strand: Direct
Name: 124025426
Synonym: NATL1_07191
Alternate gene names: NA
Gene position: 663174-663857 (Clockwise)
Preceding gene: 124025423
Following gene: 124025427
Centisome position: 35.56
GC content: 34.36
Gene sequence:
>684_bases ATGAACCGAACGCCGGAACCAGAGCTCATGCAAAGCCCTTCGCAGGTAAGGGCTTACGCGGATGCAGATTTCTCTAAGAG TGATTCTATGGTGGTTAAATCGCTTGAAAAATATTTAAAAAAAGTAGGAAGAACTTTTAATAAAACTGATTTAATTTTTG ATATGGCATGTGGACCAGGCAATATTTCAGAGAGAATTGCCAAGAATTGGCCTTTCGTAAATGTTGTGGGAATTGATGGC TCAAAGGAAATGTTGAATGAAGCAGAAAAGAAACTTTCCAAAAAGATTACGAAGAATCTCTCTTATCAATTGATTGAAAT TAATTCAATAGCCAAAGGTGAAACACATTTTCCTTTTAAAGCTGATGTAATTGTCAGTAATAGTGCCTTGCATCATTTTC ATTATCCTTATAGGTTTTGGGGTGCATTAAAAAAACTTGGTAGAACCAAGTGCATTCATGTTCATCGTGATTTAATAAGG CCTACTTCTGAAGAAAAAGCATTTGAGATACAAGAAAAACATCTTTCAAATTCCCCAGAAATTCTAAAAAAGGATTTTTA TGCATCTCTCAAGGCATCATTTACAGTTGATGAAGTAAATCAACAGTTAATTGATGCAGGGTTATCTCAATTAGAGGTTT TTCAAGTTGATGAGCTTTATTTTGAGATTATTGGGTGTACTTAA
Upstream 100 bases:
>100_bases CCTTGGGTAAGTACCACGGTAACGCCATCTATAGCGTTGGCAAGTTTTTTTAACACCATCTACAGGGGCTTCAAATTAAA AAATTTTTTTTTTTCTAGTA
Downstream 100 bases:
>100_bases TCTTTCCCCTGAACAAATGCACAATCAAAAACAATAATGAAATCAACTCCCCAAGACAAGACTAATTTAGATCCAAATTT AGTAGAAGAATTAACTGTAT
Product: ubiquinone/menaquinone biosynthesis methylase
Products: NA
Alternate protein names: Methyltransferase Type; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; SAM Dependent Methyltransferase; Methyltransferase Domain Family; Methylase
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNRTPEPELMQSPSQVRAYADADFSKSDSMVVKSLEKYLKKVGRTFNKTDLIFDMACGPGNISERIAKNWPFVNVVGIDG SKEMLNEAEKKLSKKITKNLSYQLIEINSIAKGETHFPFKADVIVSNSALHHFHYPYRFWGALKKLGRTKCIHVHRDLIR PTSEEKAFEIQEKHLSNSPEILKKDFYASLKASFTVDEVNQQLIDAGLSQLEVFQVDELYFEIIGCT
Sequences:
>Translated_227_residues MNRTPEPELMQSPSQVRAYADADFSKSDSMVVKSLEKYLKKVGRTFNKTDLIFDMACGPGNISERIAKNWPFVNVVGIDG SKEMLNEAEKKLSKKITKNLSYQLIEINSIAKGETHFPFKADVIVSNSALHHFHYPYRFWGALKKLGRTKCIHVHRDLIR PTSEEKAFEIQEKHLSNSPEILKKDFYASLKASFTVDEVNQQLIDAGLSQLEVFQVDELYFEIIGCT >Mature_227_residues MNRTPEPELMQSPSQVRAYADADFSKSDSMVVKSLEKYLKKVGRTFNKTDLIFDMACGPGNISERIAKNWPFVNVVGIDG SKEMLNEAEKKLSKKITKNLSYQLIEINSIAKGETHFPFKADVIVSNSALHHFHYPYRFWGALKKLGRTKCIHVHRDLIR PTSEEKAFEIQEKHLSNSPEILKKDFYASLKASFTVDEVNQQLIDAGLSQLEVFQVDELYFEIIGCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25907; Mature: 25907
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTPEPELMQSPSQVRAYADADFSKSDSMVVKSLEKYLKKVGRTFNKTDLIFDMACGPG CCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC NISERIAKNWPFVNVVGIDGSKEMLNEAEKKLSKKITKNLSYQLIEINSIAKGETHFPFK CHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEE ADVIVSNSALHHFHYPYRFWGALKKLGRTKCIHVHRDLIRPTSEEKAFEIQEKHLSNSPE EEEEEECCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHH ILKKDFYASLKASFTVDEVNQQLIDAGLSQLEVFQVDELYFEIIGCT HHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRTPEPELMQSPSQVRAYADADFSKSDSMVVKSLEKYLKKVGRTFNKTDLIFDMACGPG CCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC NISERIAKNWPFVNVVGIDGSKEMLNEAEKKLSKKITKNLSYQLIEINSIAKGETHFPFK CHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEE ADVIVSNSALHHFHYPYRFWGALKKLGRTKCIHVHRDLIRPTSEEKAFEIQEKHLSNSPE EEEEEECCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHH ILKKDFYASLKASFTVDEVNQQLIDAGLSQLEVFQVDELYFEIIGCT HHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA