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The map label for this gene is yjcF [C]

Identifier: 124025420

GI number: 124025420

Start: 656653

End: 657123

Strand: Direct

Name: yjcF [C]

Synonym: NATL1_07131

Alternate gene names: 124025420

Gene position: 656653-657123 (Clockwise)

Preceding gene: 124025418

Following gene: 124025421

Centisome position: 35.21

GC content: 35.24

Gene sequence:

>471_bases
ATGTTTAACCGTCTTCTTTTTTTTGTAAGCTCTGTTCTTTTTTTCTTTTATCCTCTGCCAGCTTATTCAGCTTTGGACTA
TGGAAAGCAAACCTTGATAGGTTCTGATTTCTCCAATATCGATTTGAAAGGTGCGACTTTCTATTTAAGTGATCTCCAAG
ATTCTGATTTTTCAGGCAGTGATCTTCAAGGGGCTAGTTTTTTTGATGCAAAGCTTGAAAACGCTAATCTAAGTAATACA
AATATGAGAGATGTAACAATGGATGCAGCTATACTTAATGGCGCAAACCTTTCAAATAGCGTATTAGAAGGTGCTTTTGC
TTACAATGCAAAATTCGAAAACGTTATTATTGAAGGTGCCGACTTTACTGATGTCTTGATCGCAAATGATGTTAGAAATA
AACTATGCCTTATCGCAAATGGGATAAACAGTGTGACTAACAAAAAAACAAGTGATACATTGGACTGTTAG

Upstream 100 bases:

>100_bases
TATAGTTTTGTATTTTAATATATAATTTATATTAAATCCAATATTTAATTGTCAGACCCTTTTGGATTAAAATATAATCA
TTAGTAGCAATTAGAAAGTT

Downstream 100 bases:

>100_bases
TAGCCACTATGCTTATTAAGAAAAATATTAATCACTCTAAATATATTTTTTGGATTTCAATTTTATTTATATGGATTCTT
TCGACCATAATTGACCGTAT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MFNRLLFFVSSVLFFFYPLPAYSALDYGKQTLIGSDFSNIDLKGATFYLSDLQDSDFSGSDLQGASFFDAKLENANLSNT
NMRDVTMDAAILNGANLSNSVLEGAFAYNAKFENVIIEGADFTDVLIANDVRNKLCLIANGINSVTNKKTSDTLDC

Sequences:

>Translated_156_residues
MFNRLLFFVSSVLFFFYPLPAYSALDYGKQTLIGSDFSNIDLKGATFYLSDLQDSDFSGSDLQGASFFDAKLENANLSNT
NMRDVTMDAAILNGANLSNSVLEGAFAYNAKFENVIIEGADFTDVLIANDVRNKLCLIANGINSVTNKKTSDTLDC
>Mature_156_residues
MFNRLLFFVSSVLFFFYPLPAYSALDYGKQTLIGSDFSNIDLKGATFYLSDLQDSDFSGSDLQGASFFDAKLENANLSNT
NMRDVTMDAAILNGANLSNSVLEGAFAYNAKFENVIIEGADFTDVLIANDVRNKLCLIANGINSVTNKKTSDTLDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17050; Mature: 17050

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNRLLFFVSSVLFFFYPLPAYSALDYGKQTLIGSDFSNIDLKGATFYLSDLQDSDFSGS
CHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCC
DLQGASFFDAKLENANLSNTNMRDVTMDAAILNGANLSNSVLEGAFAYNAKFENVIIEGA
CCCCCCEECCCCCCCCCCCCCCCCEEEHHHHCCCCCCCHHHHHHHHEECCEECEEEEECC
DFTDVLIANDVRNKLCLIANGINSVTNKKTSDTLDC
CCCEEEEECCCCCCEEEEECCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MFNRLLFFVSSVLFFFYPLPAYSALDYGKQTLIGSDFSNIDLKGATFYLSDLQDSDFSGS
CHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCC
DLQGASFFDAKLENANLSNTNMRDVTMDAAILNGANLSNSVLEGAFAYNAKFENVIIEGA
CCCCCCEECCCCCCCCCCCCCCCCEEEHHHHCCCCCCCHHHHHHHHEECCEECEEEEECC
DFTDVLIANDVRNKLCLIANGINSVTNKKTSDTLDC
CCCEEEEECCCCCCEEEEECCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA