Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025398
Identifier: 124025398
GI number: 124025398
Start: 634320
End: 635705
Strand: Direct
Name: 124025398
Synonym: NATL1_06891
Alternate gene names: NA
Gene position: 634320-635705 (Clockwise)
Preceding gene: 124025397
Following gene: 124025399
Centisome position: 34.02
GC content: 36.51
Gene sequence:
>1386_bases ATGAGGCTGTCGTTTTTAGGTTTGGAAGACCTATACAAAATGAATGCAATCCCAACGTTAGTCCTTTCCTTGGGTTTGCT TGGACTTATAGGAATTCTTCTAACCCTTGGTAGAAGATTGGATTCTGCGATGAAGTTGGAAAGATTTGGTATTCCCATAG CCCTTTTAATTGGAGCTTTAGGTTTTTTAATTGGTCCTTATGGACCTTTTTCTTTATTACCAGAAAGGGTTCTGAATACT TGGATGCAATTACCAACTCCATTGCTTACTTTAGTCTTCGCGACCTTAATGCTAGGAAGACCTATTCCAAGAATTAGTGC TTTATGGAAACCAGTTGCTTCGCAGGCATTGCTTGGACTTTTATTGGGTTTTGGTCAATATGTTGTAGGTGGGATAATTG TGCTTTCATTTTTGCTTCCTTATTTAGGAGTAGACCCACTGATGGGATGCATTATTGAGATTGGTTTTGAAGGAGGACAT GGAGCTGCGGCAATAATGGGAGAAAGTTTTATGAAGTTAGGCTTCCCTGAGGGATTAGATCTGGGCTTTGCAATGGCAAC TGTAGGATTACTTGCTTCTACTTTGTTAGGGAGCGGTTTGGTTGTCCTAGGTAGGTTTTTTGGATGGCTTGTAACTACTG AACAAGAGCTTCCAAATGATTTAAATGATATTGAATTTGAAATCAAACCAATTGAACAACTTAAGTCGCTTTTATATAAT TTTGCTCTACTAGGATTAGCGGTATTGATTGGAATCTTTTTTCTTTATTGTTTAAGGCTATCTTCTAATTTTATGAGTGA TATAAGTAAGCAGGTGATATTAGCTTTCCCAGTATTTCCTTTGGCTTTGATGGGTTCATTTTTAGTTAGATTTTTATTGG AAAAAACTGGAAAGACTAAATTAGTATCATCACTTTTTCAACGTGAGATTGGCATACTTTCAACCGATTTACTCATAATT ACCGCGATGGCAGGATTGAATTTACCTTTATTAGTTAACTACTGGGTTCCGATAACCATTTTAGCCGTTGGTGGATTGAT TTGGAATCTTGTAGGGATGTTGATTTTTTCTAGATTATTTTTTAGAGAAGAATGGTTTGTAAGAGCAATAGCAGAGTTTG GAAATTCAACAGGAGTTGCAGCTAGTGGACTATTACTTTTGAGATTGGCTGATCCAAGAAATTCTACTAATACGTTGCCT GTATTTTCTATTAAGCAATTATTTCTTCAACCCCTTCTTTCTGGAGGTCTGATTACTGTAATAGCGCCTTTGTTTATTAG TAATTTTGGGCTTAAAGGGTGGACAGAATTTTGTGGATTAGTTTCATTGTCTTTATGTGTAGTGGCAATATCTCTACAGT CAAAATATACAAAAGCCTCAGCATGA
Upstream 100 bases:
>100_bases TTGAGATATGATAAGAATCAAAATTACTTTAGATGTTAAATATTCATATGGGATATTATTTTTTAGGGATTTTCATTTAC TTCCGTAAGCTTGTTAATAG
Downstream 100 bases:
>100_bases TAAATATGTACTTAACTAAAGTTATAATTTATATAAATATAAGTTTTAATAAACTATTTTCCTCCTTCATATGAATCGAC AAATTTACAAAGATATTCCC
Product: sodium/solute symporter family protein
Products: NA
Alternate protein names: Na+/Glutamate Symporter; Sodium/Solute Symporter Family Protein; Sodium/Glutamate Symporter Superfamily; SodiumSolute Symporter ESS Family; Sodium/Glutamate Symport Carrier Protein
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MRLSFLGLEDLYKMNAIPTLVLSLGLLGLIGILLTLGRRLDSAMKLERFGIPIALLIGALGFLIGPYGPFSLLPERVLNT WMQLPTPLLTLVFATLMLGRPIPRISALWKPVASQALLGLLLGFGQYVVGGIIVLSFLLPYLGVDPLMGCIIEIGFEGGH GAAAIMGESFMKLGFPEGLDLGFAMATVGLLASTLLGSGLVVLGRFFGWLVTTEQELPNDLNDIEFEIKPIEQLKSLLYN FALLGLAVLIGIFFLYCLRLSSNFMSDISKQVILAFPVFPLALMGSFLVRFLLEKTGKTKLVSSLFQREIGILSTDLLII TAMAGLNLPLLVNYWVPITILAVGGLIWNLVGMLIFSRLFFREEWFVRAIAEFGNSTGVAASGLLLLRLADPRNSTNTLP VFSIKQLFLQPLLSGGLITVIAPLFISNFGLKGWTEFCGLVSLSLCVVAISLQSKYTKASA
Sequences:
>Translated_461_residues MRLSFLGLEDLYKMNAIPTLVLSLGLLGLIGILLTLGRRLDSAMKLERFGIPIALLIGALGFLIGPYGPFSLLPERVLNT WMQLPTPLLTLVFATLMLGRPIPRISALWKPVASQALLGLLLGFGQYVVGGIIVLSFLLPYLGVDPLMGCIIEIGFEGGH GAAAIMGESFMKLGFPEGLDLGFAMATVGLLASTLLGSGLVVLGRFFGWLVTTEQELPNDLNDIEFEIKPIEQLKSLLYN FALLGLAVLIGIFFLYCLRLSSNFMSDISKQVILAFPVFPLALMGSFLVRFLLEKTGKTKLVSSLFQREIGILSTDLLII TAMAGLNLPLLVNYWVPITILAVGGLIWNLVGMLIFSRLFFREEWFVRAIAEFGNSTGVAASGLLLLRLADPRNSTNTLP VFSIKQLFLQPLLSGGLITVIAPLFISNFGLKGWTEFCGLVSLSLCVVAISLQSKYTKASA >Mature_461_residues MRLSFLGLEDLYKMNAIPTLVLSLGLLGLIGILLTLGRRLDSAMKLERFGIPIALLIGALGFLIGPYGPFSLLPERVLNT WMQLPTPLLTLVFATLMLGRPIPRISALWKPVASQALLGLLLGFGQYVVGGIIVLSFLLPYLGVDPLMGCIIEIGFEGGH GAAAIMGESFMKLGFPEGLDLGFAMATVGLLASTLLGSGLVVLGRFFGWLVTTEQELPNDLNDIEFEIKPIEQLKSLLYN FALLGLAVLIGIFFLYCLRLSSNFMSDISKQVILAFPVFPLALMGSFLVRFLLEKTGKTKLVSSLFQREIGILSTDLLII TAMAGLNLPLLVNYWVPITILAVGGLIWNLVGMLIFSRLFFREEWFVRAIAEFGNSTGVAASGLLLLRLADPRNSTNTLP VFSIKQLFLQPLLSGGLITVIAPLFISNFGLKGWTEFCGLVSLSLCVVAISLQSKYTKASA
Specific function: Unknown
COG id: COG0786
COG function: function code E; Na+/glutamate symporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50024; Mature: 50024
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSFLGLEDLYKMNAIPTLVLSLGLLGLIGILLTLGRRLDSAMKLERFGIPIALLIGAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GFLIGPYGPFSLLPERVLNTWMQLPTPLLTLVFATLMLGRPIPRISALWKPVASQALLGL HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLGFGQYVVGGIIVLSFLLPYLGVDPLMGCIIEIGFEGGHGAAAIMGESFMKLGFPEGLD HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC LGFAMATVGLLASTLLGSGLVVLGRFFGWLVTTEQELPNDLNDIEFEIKPIEQLKSLLYN HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEHHHHHHHHHHH FALLGLAVLIGIFFLYCLRLSSNFMSDISKQVILAFPVFPLALMGSFLVRFLLEKTGKTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LVSSLFQREIGILSTDLLIITAMAGLNLPLLVNYWVPITILAVGGLIWNLVGMLIFSRLF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FREEWFVRAIAEFGNSTGVAASGLLLLRLADPRNSTNTLPVFSIKQLFLQPLLSGGLITV HHHHHHHHHHHHHCCCCCCHHHCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHH IAPLFISNFGLKGWTEFCGLVSLSLCVVAISLQSKYTKASA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLSFLGLEDLYKMNAIPTLVLSLGLLGLIGILLTLGRRLDSAMKLERFGIPIALLIGAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GFLIGPYGPFSLLPERVLNTWMQLPTPLLTLVFATLMLGRPIPRISALWKPVASQALLGL HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLGFGQYVVGGIIVLSFLLPYLGVDPLMGCIIEIGFEGGHGAAAIMGESFMKLGFPEGLD HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC LGFAMATVGLLASTLLGSGLVVLGRFFGWLVTTEQELPNDLNDIEFEIKPIEQLKSLLYN HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEHHHHHHHHHHH FALLGLAVLIGIFFLYCLRLSSNFMSDISKQVILAFPVFPLALMGSFLVRFLLEKTGKTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LVSSLFQREIGILSTDLLIITAMAGLNLPLLVNYWVPITILAVGGLIWNLVGMLIFSRLF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FREEWFVRAIAEFGNSTGVAASGLLLLRLADPRNSTNTLPVFSIKQLFLQPLLSGGLITV HHHHHHHHHHHHHCCCCCCHHHCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHH IAPLFISNFGLKGWTEFCGLVSLSLCVVAISLQSKYTKASA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA