Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124025342

Identifier: 124025342

GI number: 124025342

Start: 572231

End: 572596

Strand: Reverse

Name: 124025342

Synonym: NATL1_06311

Alternate gene names: NA

Gene position: 572596-572231 (Counterclockwise)

Preceding gene: 124025343

Following gene: 124025341

Centisome position: 30.71

GC content: 38.25

Gene sequence:

>366_bases
GTGGTTAGTTCAAGAAACTCCAATAAAGAAGTTTTTGAAGCAGAGGTACTTGAAAGTTCTGTTATCGACGAGGGGGTACT
TAAAAAGATCTTATTAAGAGCAGGCAGAGTAATTGCACAGCCAGCTTTAGAGGGATTTGAACTCATTATGGATAATTCAA
CTCCTCCTCAAGTGAGGTTATCCATTATGGGAGCACTTACTTATTTAATTGTTCCTTTTGATTTAATTCCCGACTTTATT
CCCGCCTCAGGTTTTAGCGATGATCTTGTGGCCCTAACAGCTGTAATTAGTCTATGGCAACATCACATTACTCCAGAGAT
AAAATTCAGAGCAAAATCTAAGCTGGATAAATGGTTTCCACTATGA

Upstream 100 bases:

>100_bases
ATTGCAGCAGGGAATATTGCAGACAAGTAGTTCAACGTGCATTAAGAAAGTTGAGAAAAACAGGGATTCAAAGTGGTCTT
TTAGAGACAAGTATTTAATT

Downstream 100 bases:

>100_bases
GCAAAGAACGCTGGTCAAAAGATATCGAAGAGGATCTAGTACTTCTAATCAAAGACTGGTTAAGGCAAACAGGTAGAACG
CAATCAGAACTTTGCCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MVSSRNSNKEVFEAEVLESSVIDEGVLKKILLRAGRVIAQPALEGFELIMDNSTPPQVRLSIMGALTYLIVPFDLIPDFI
PASGFSDDLVALTAVISLWQHHITPEIKFRAKSKLDKWFPL

Sequences:

>Translated_121_residues
MVSSRNSNKEVFEAEVLESSVIDEGVLKKILLRAGRVIAQPALEGFELIMDNSTPPQVRLSIMGALTYLIVPFDLIPDFI
PASGFSDDLVALTAVISLWQHHITPEIKFRAKSKLDKWFPL
>Mature_121_residues
MVSSRNSNKEVFEAEVLESSVIDEGVLKKILLRAGRVIAQPALEGFELIMDNSTPPQVRLSIMGALTYLIVPFDLIPDFI
PASGFSDDLVALTAVISLWQHHITPEIKFRAKSKLDKWFPL

Specific function: Unknown

COG id: COG3339

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13493; Mature: 13493

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSRNSNKEVFEAEVLESSVIDEGVLKKILLRAGRVIAQPALEGFELIMDNSTPPQVRL
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCHHHHH
SIMGALTYLIVPFDLIPDFIPASGFSDDLVALTAVISLWQHHITPEIKFRAKSKLDKWFP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
L
C
>Mature Secondary Structure
MVSSRNSNKEVFEAEVLESSVIDEGVLKKILLRAGRVIAQPALEGFELIMDNSTPPQVRL
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCHHHHH
SIMGALTYLIVPFDLIPDFIPASGFSDDLVALTAVISLWQHHITPEIKFRAKSKLDKWFP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA