| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025311
Identifier: 124025311
GI number: 124025311
Start: 546707
End: 547072
Strand: Reverse
Name: 124025311
Synonym: NATL1_06001
Alternate gene names: NA
Gene position: 547072-546707 (Counterclockwise)
Preceding gene: 124025313
Following gene: 124025308
Centisome position: 29.34
GC content: 39.89
Gene sequence:
>366_bases ATGTCTGCAACTCAGCCAAAGGATCCCAAAAACAATAACTCAAATGCTGAAATCAATCCAGAGCAAGCGCTAGGTTTAGT CTCGTTAGGTCTTATGCAAAAATTGTCTGACAAAGGACTTGCCGACTTGAATTGGTTAAAAGAAGACGAAAAATGTGATA CGTATGAGCTGCGTCAAAGACTTGAACTAACTTCTCTAGCTATAGAAACAGGTGCTCCACTAAGCACAACAGAAGTATCA AAACTTTTGGGCGTTAGGCCAGGCTCCTCAAAAGTTGAGAGAGGTGGTCTCATTGCTAAGAAGTTATCAAGAAATGTTTG GAGATTAATCAAATCAAGCCAAGAAAGTTCTCATTGGCGTAATTAG
Upstream 100 bases:
>100_bases CGCGAGATACTACCTCAAAGATTGTCTTTTTAGCTAGCAATTGAGACTTGCATGCTGATTGTAAGCCGATAAATTCAAGA TATATTGATTTTACGAAAGA
Downstream 100 bases:
>100_bases AAGGACCAAATTTAGGCTTTATAATGAGCCTTAGCGTCATATAGAGTTTCTTCGTTGATTTCTCTACATCCAGCTTGGCG AGCATAATTCTCTGTATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSATQPKDPKNNNSNAEINPEQALGLVSLGLMQKLSDKGLADLNWLKEDEKCDTYELRQRLELTSLAIETGAPLSTTEVS KLLGVRPGSSKVERGGLIAKKLSRNVWRLIKSSQESSHWRN
Sequences:
>Translated_121_residues MSATQPKDPKNNNSNAEINPEQALGLVSLGLMQKLSDKGLADLNWLKEDEKCDTYELRQRLELTSLAIETGAPLSTTEVS KLLGVRPGSSKVERGGLIAKKLSRNVWRLIKSSQESSHWRN >Mature_120_residues SATQPKDPKNNNSNAEINPEQALGLVSLGLMQKLSDKGLADLNWLKEDEKCDTYELRQRLELTSLAIETGAPLSTTEVSK LLGVRPGSSKVERGGLIAKKLSRNVWRLIKSSQESSHWRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13416; Mature: 13285
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATQPKDPKNNNSNAEINPEQALGLVSLGLMQKLSDKGLADLNWLKEDEKCDTYELRQR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHH LELTSLAIETGAPLSTTEVSKLLGVRPGSSKVERGGLIAKKLSRNVWRLIKSSQESSHWR HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCC N C >Mature Secondary Structure SATQPKDPKNNNSNAEINPEQALGLVSLGLMQKLSDKGLADLNWLKEDEKCDTYELRQR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHH LELTSLAIETGAPLSTTEVSKLLGVRPGSSKVERGGLIAKKLSRNVWRLIKSSQESSHWR HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA