| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025306
Identifier: 124025306
GI number: 124025306
Start: 541083
End: 541508
Strand: Direct
Name: 124025306
Synonym: NATL1_05951
Alternate gene names: NA
Gene position: 541083-541508 (Clockwise)
Preceding gene: 124025304
Following gene: 124025307
Centisome position: 29.02
GC content: 33.1
Gene sequence:
>426_bases TTGGGACTTTCTAATTTAATTTTGGGACAACCTCAACGAATTGAAGAGCAGTTCAGAAGGAAACGTTCAAAAAAAATTAA TAAAAGCAATCCTTCTGTAAATAAAAAAATCGATGCTTTTACTCAAGTTTCTGAATTCCAGAAAGAAGAAGTTAGGCGGG AGCTTTTATATAGCAATGTGGGATTAATTTTGAAGTTTGGATTATTTATTGTGTTTGCAACCAGCCTCATGAACTTAGGA CTTGCTTCTCATCAACGTGTGAATAGAAATCTAGAGTTGTCAAATTTATTAGAAAAAGAATCAAAAAAACTTCACAAGTT AAGACTGCGTTTTGATGAAATGTTTACTAATGGTGGAGAACAAAGTTTTTTTAAGGAGCAAGATCAGTGGATTACTCCAA ATAGTGTCAGAGTTATCTGGCGATGA
Upstream 100 bases:
>100_bases ATTTATATACCCCCATATGTATTGTCTTTTTGAATTTATAAATGCATTGGAAGAAGTCAAATAATTGATTCCATTATTAA TTAAGTTACCATGAAAAAAA
Downstream 100 bases:
>100_bases TTAACTTTGCTTCTCTTAGGTTTAGATTTGTGTTTGAAAATTGATTTAGATAGTTTTTATTAAGGAATATGGCTCTAGTA CAAGCTGCACCAGGAACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MGLSNLILGQPQRIEEQFRRKRSKKINKSNPSVNKKIDAFTQVSEFQKEEVRRELLYSNVGLILKFGLFIVFATSLMNLG LASHQRVNRNLELSNLLEKESKKLHKLRLRFDEMFTNGGEQSFFKEQDQWITPNSVRVIWR
Sequences:
>Translated_141_residues MGLSNLILGQPQRIEEQFRRKRSKKINKSNPSVNKKIDAFTQVSEFQKEEVRRELLYSNVGLILKFGLFIVFATSLMNLG LASHQRVNRNLELSNLLEKESKKLHKLRLRFDEMFTNGGEQSFFKEQDQWITPNSVRVIWR >Mature_140_residues GLSNLILGQPQRIEEQFRRKRSKKINKSNPSVNKKIDAFTQVSEFQKEEVRRELLYSNVGLILKFGLFIVFATSLMNLGL ASHQRVNRNLELSNLLEKESKKLHKLRLRFDEMFTNGGEQSFFKEQDQWITPNSVRVIWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16626; Mature: 16494
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSNLILGQPQRIEEQFRRKRSKKINKSNPSVNKKIDAFTQVSEFQKEEVRRELLYSNV CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLILKFGLFIVFATSLMNLGLASHQRVNRNLELSNLLEKESKKLHKLRLRFDEMFTNGGE HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QSFFKEQDQWITPNSVRVIWR HHHHHHCCCCCCCCCEEEEEC >Mature Secondary Structure GLSNLILGQPQRIEEQFRRKRSKKINKSNPSVNKKIDAFTQVSEFQKEEVRRELLYSNV CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLILKFGLFIVFATSLMNLGLASHQRVNRNLELSNLLEKESKKLHKLRLRFDEMFTNGGE HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QSFFKEQDQWITPNSVRVIWR HHHHHHCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA