Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
---|---|
Accession | NC_008819 |
Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is arsC [H]
Identifier: 124025281
GI number: 124025281
Start: 515572
End: 515952
Strand: Direct
Name: arsC [H]
Synonym: NATL1_05701
Alternate gene names: 124025281
Gene position: 515572-515952 (Clockwise)
Preceding gene: 124025280
Following gene: 124025282
Centisome position: 27.65
GC content: 30.45
Gene sequence:
>381_bases TTGGGTAAACTTATCTTTTTAGGCTTTGAAAACTTGAAATTATTTAATTATTCCTCGTGCTCAACTTGTCGCAGAGCGAT TAAATGGCTAAAAAACAATGATATTACTTTTGAATTAATTGATCTTTTAAAATCCCCCCCGTCCAAGGAGATGCTTATCT CAGCTAGTGAGCTATATGGGGATAGAAAATATCTTATAAATACTAGTGGTTTTATATATCGTTCTATTGGTTCGGACGCA GTAAAAAAAATGAGTGATAACGAATTTTTTGAGCAACTTTTTATAGAACCCAGATTAATAAAGAGACCTTTTTTATATAA ATCTAATAAATGCTTTTTAGTTGGATTTAAAGAAGAAAAGTGGGCTGAGAAATTACTTTGA
Upstream 100 bases:
>100_bases TGGATGGAGAGACTACGATGCTGTTGATGAATTATTAAAAAGCTGCATAGAAGCACATCATTTGGAAATAACACAAAAAT AACTATTTTAATTTTCTTTT
Downstream 100 bases:
>100_bases AATTCACATGATCACTATCATTGACTGAATATGAGTAGTTTTTACAAATAAAGTAGACTATATATTTATTATTGATAATC AAGTGAAGCAAAATTATTCA
Product: putative arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MGKLIFLGFENLKLFNYSSCSTCRRAIKWLKNNDITFELIDLLKSPPSKEMLISASELYGDRKYLINTSGFIYRSIGSDA VKKMSDNEFFEQLFIEPRLIKRPFLYKSNKCFLVGFKEEKWAEKLL
Sequences:
>Translated_126_residues MGKLIFLGFENLKLFNYSSCSTCRRAIKWLKNNDITFELIDLLKSPPSKEMLISASELYGDRKYLINTSGFIYRSIGSDA VKKMSDNEFFEQLFIEPRLIKRPFLYKSNKCFLVGFKEEKWAEKLL >Mature_125_residues GKLIFLGFENLKLFNYSSCSTCRRAIKWLKNNDITFELIDLLKSPPSKEMLISASELYGDRKYLINTSGFIYRSIGSDAV KKMSDNEFFEQLFIEPRLIKRPFLYKSNKCFLVGFKEEKWAEKLL
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 - InterPro: IPR006504 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 14799; Mature: 14667
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLIFLGFENLKLFNYSSCSTCRRAIKWLKNNDITFELIDLLKSPPSKEMLISASELYG CCCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHEEEHHHHCC DRKYLINTSGFIYRSIGSDAVKKMSDNEFFEQLFIEPRLIKRPFLYKSNKCFLVGFKEEK CCEEEEECCCEEEECCCHHHHHHCCCHHHHHHHHCCCHHHCCCCEEECCCEEEEEECHHH WAEKLL HHHHCC >Mature Secondary Structure GKLIFLGFENLKLFNYSSCSTCRRAIKWLKNNDITFELIDLLKSPPSKEMLISASELYG CCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHEEEHHHHCC DRKYLINTSGFIYRSIGSDAVKKMSDNEFFEQLFIEPRLIKRPFLYKSNKCFLVGFKEEK CCEEEEECCCEEEECCCHHHHHHCCCHHHHHHHHCCCHHHCCCCEEECCCEEEEEECHHH WAEKLL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]