Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025261
Identifier: 124025261
GI number: 124025261
Start: 497581
End: 499110
Strand: Direct
Name: 124025261
Synonym: NATL1_05501
Alternate gene names: NA
Gene position: 497581-499110 (Clockwise)
Preceding gene: 124025256
Following gene: 124025262
Centisome position: 26.68
GC content: 37.45
Gene sequence:
>1530_bases TTGTCAAAGTCTGCTTGGCAGCTTTTGGGTGATTACCTAAAAGATACGCAGTTGTTGGGATCTATACAAAGCACTCTCTA CTGGGATCAAAATACATCTATGCCTATTGCTGGTTCCAATTGGAGAGGAGAGCAATTAAGTCTTTTAGCTAAGCAACTTC ATGCAAGACAAAGTTCTGAACAGTTCGAAATTTTAATAAAAGAAGCTAAATCTGAACTTCAAAAATCAAAAGAAAAAGAT GATTTTGAATCACAACTCATCACAGATAGATTTAGAAATATTGATTTGCTTGAGCAAGATTTCAATAGACAGAAAAGTTT GGATCCTCAATTGGTCGTTGAGCTCGCAACAGCAAAGTCTGAAGGGTATATGTGTTGGCAGGAAGCTAGGAAAAATAATG ATTTCAAAAGCTTTTCTCCAGCTCTTAAGAAATTAATTGCATTACGAACAGAACAATCCAATCAGCTCTGTGAAGAAAGA AGTTGCTGGGAGACACTTGCCCAGCCTTTTGAACCGAATTTAACGATTGATCGTGTAAGCGAACTATTTGAACCTTTACA AAAGAGATTGCCAGAATTGATTCAGAAGGCTGAGACAATTACCAATAAAAAGAGTGAAAAATGGGATTTAGCAATTAGTG ATCAAGAAAAACTCTGTCAAATACTTTTAAATGATTGGTCTAGGGATCCTGCTAATACAGCGATAGCTAAGTCCCCTCAT CCATTCTCTATAACTTTAGGTCCGGATGATTATCGAATTACGACTCGAATAGTTAAAGGTCAGCCCCTTTCTTGCTTATT AGCTACTGCCCATGAGTGGGGTCATTCTCTTTATGAACAAGGTTTGCCTTCTAAAAGTCACCAATGGTTTGCATGGCCGT TAGGTCAAGCAACCTCTATGGCTGTTCATGAGAGTCAATCTCTATTTTGGGAAAATAGGATTGCTAGGAGCTTTTCATTT GCAAAGTCTTTTTGGCATCATTTTGAGAATGCAGGTGCTCCAATTCACTCTGGAGATGATTTATGGATCAATCTAAATCC ATTTACTCCGGGATTGAACCGAGTAGAGGCTGATGAACTCAGTTATGGCTTGCACATAATGATTAGGACTGAATTGGAAA TTGATCTTCTCGAGAGAGGCCTTTCTGTGGAAGATCTGCCTAATGAATGGAATAAAAGGTATTTGAACCTTTTAGGTGTG TCGCCTAAAAATGATACTGAAGGATGTTTGCAAGATGTGCACTGGAGTGAGGGGATGTTTGGTTATTTCCCTTCTTATTT GCTTGGTCATCTTATTAGCGCTCAGTTGACAAAAACTCTTGAAGAAGATTTAGGGAAAATTGAAAATCTTATTGAATCTA CGGAAATCAGTAAAATATTGGGTTGGCTTCGCAAAAATGTTCATCATTATGGGAGAAGTTTAGATTCTGAGGAACTTGTA AGGAAGGTCTCTGGAGCAAAATTATCACCAACTTATTTTCTTGAATACTTAGATAATAAACTTGAAAAGCTGTCTACAAT CTCTAAGTAA
Upstream 100 bases:
>100_bases TTAATTAAGAACTTATAATTTAAATATTTAAAATTGATCAAATACTGATCTCTTTTAATCAATTTGATATTAGGATTACA CAAATATCAAATTAAATACA
Downstream 100 bases:
>100_bases AATAGACATATATTGCCAAAAAAATTAAGAGGAGCATGTCTTTTGTTGAAACTTTTCTAAATTATCCGACGCAAGTCCAT TTGCATTTACTGCGTTGATT
Product: carboxypeptidase Taq (M32) metallopeptidase
Products: NA
Alternate protein names: Carboxypeptidase Taq [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MSKSAWQLLGDYLKDTQLLGSIQSTLYWDQNTSMPIAGSNWRGEQLSLLAKQLHARQSSEQFEILIKEAKSELQKSKEKD DFESQLITDRFRNIDLLEQDFNRQKSLDPQLVVELATAKSEGYMCWQEARKNNDFKSFSPALKKLIALRTEQSNQLCEER SCWETLAQPFEPNLTIDRVSELFEPLQKRLPELIQKAETITNKKSEKWDLAISDQEKLCQILLNDWSRDPANTAIAKSPH PFSITLGPDDYRITTRIVKGQPLSCLLATAHEWGHSLYEQGLPSKSHQWFAWPLGQATSMAVHESQSLFWENRIARSFSF AKSFWHHFENAGAPIHSGDDLWINLNPFTPGLNRVEADELSYGLHIMIRTELEIDLLERGLSVEDLPNEWNKRYLNLLGV SPKNDTEGCLQDVHWSEGMFGYFPSYLLGHLISAQLTKTLEEDLGKIENLIESTEISKILGWLRKNVHHYGRSLDSEELV RKVSGAKLSPTYFLEYLDNKLEKLSTISK
Sequences:
>Translated_509_residues MSKSAWQLLGDYLKDTQLLGSIQSTLYWDQNTSMPIAGSNWRGEQLSLLAKQLHARQSSEQFEILIKEAKSELQKSKEKD DFESQLITDRFRNIDLLEQDFNRQKSLDPQLVVELATAKSEGYMCWQEARKNNDFKSFSPALKKLIALRTEQSNQLCEER SCWETLAQPFEPNLTIDRVSELFEPLQKRLPELIQKAETITNKKSEKWDLAISDQEKLCQILLNDWSRDPANTAIAKSPH PFSITLGPDDYRITTRIVKGQPLSCLLATAHEWGHSLYEQGLPSKSHQWFAWPLGQATSMAVHESQSLFWENRIARSFSF AKSFWHHFENAGAPIHSGDDLWINLNPFTPGLNRVEADELSYGLHIMIRTELEIDLLERGLSVEDLPNEWNKRYLNLLGV SPKNDTEGCLQDVHWSEGMFGYFPSYLLGHLISAQLTKTLEEDLGKIENLIESTEISKILGWLRKNVHHYGRSLDSEELV RKVSGAKLSPTYFLEYLDNKLEKLSTISK >Mature_508_residues SKSAWQLLGDYLKDTQLLGSIQSTLYWDQNTSMPIAGSNWRGEQLSLLAKQLHARQSSEQFEILIKEAKSELQKSKEKDD FESQLITDRFRNIDLLEQDFNRQKSLDPQLVVELATAKSEGYMCWQEARKNNDFKSFSPALKKLIALRTEQSNQLCEERS CWETLAQPFEPNLTIDRVSELFEPLQKRLPELIQKAETITNKKSEKWDLAISDQEKLCQILLNDWSRDPANTAIAKSPHP FSITLGPDDYRITTRIVKGQPLSCLLATAHEWGHSLYEQGLPSKSHQWFAWPLGQATSMAVHESQSLFWENRIARSFSFA KSFWHHFENAGAPIHSGDDLWINLNPFTPGLNRVEADELSYGLHIMIRTELEIDLLERGLSVEDLPNEWNKRYLNLLGVS PKNDTEGCLQDVHWSEGMFGYFPSYLLGHLISAQLTKTLEEDLGKIENLIESTEISKILGWLRKNVHHYGRSLDSEELVR KVSGAKLSPTYFLEYLDNKLEKLSTISK
Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: =3.4.17.19 [H]
Molecular weight: Translated: 58502; Mature: 58370
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSAWQLLGDYLKDTQLLGSIQSTLYWDQNTSMPIAGSNWRGEQLSLLAKQLHARQSSE CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH QFEILIKEAKSELQKSKEKDDFESQLITDRFRNIDLLEQDFNRQKSLDPQLVVELATAKS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCC EGYMCWQEARKNNDFKSFSPALKKLIALRTEQSNQLCEERSCWETLAQPFEPNLTIDRVS CCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH ELFEPLQKRLPELIQKAETITNKKSEKWDLAISDQEKLCQILLNDWSRDPANTAIAKSPH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC PFSITLGPDDYRITTRIVKGQPLSCLLATAHEWGHSLYEQGLPSKSHQWFAWPLGQATSM CEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHH AVHESQSLFWENRIARSFSFAKSFWHHFENAGAPIHSGDDLWINLNPFTPGLNRVEADEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHH SYGLHIMIRTELEIDLLERGLSVEDLPNEWNKRYLNLLGVSPKNDTEGCLQDVHWSEGMF CCCEEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCH GYFPSYLLGHLISAQLTKTLEEDLGKIENLIESTEISKILGWLRKNVHHYGRSLDSEELV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RKVSGAKLSPTYFLEYLDNKLEKLSTISK HHHCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKSAWQLLGDYLKDTQLLGSIQSTLYWDQNTSMPIAGSNWRGEQLSLLAKQLHARQSSE CCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH QFEILIKEAKSELQKSKEKDDFESQLITDRFRNIDLLEQDFNRQKSLDPQLVVELATAKS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCC EGYMCWQEARKNNDFKSFSPALKKLIALRTEQSNQLCEERSCWETLAQPFEPNLTIDRVS CCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH ELFEPLQKRLPELIQKAETITNKKSEKWDLAISDQEKLCQILLNDWSRDPANTAIAKSPH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC PFSITLGPDDYRITTRIVKGQPLSCLLATAHEWGHSLYEQGLPSKSHQWFAWPLGQATSM CEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHH AVHESQSLFWENRIARSFSFAKSFWHHFENAGAPIHSGDDLWINLNPFTPGLNRVEADEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHH SYGLHIMIRTELEIDLLERGLSVEDLPNEWNKRYLNLLGVSPKNDTEGCLQDVHWSEGMF CCCEEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCH GYFPSYLLGHLISAQLTKTLEEDLGKIENLIESTEISKILGWLRKNVHHYGRSLDSEELV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RKVSGAKLSPTYFLEYLDNKLEKLSTISK HHHCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765282; 1369078 [H]