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The map label for this gene is nrdR

Identifier: 124025116

GI number: 124025116

Start: 372545

End: 373024

Strand: Reverse

Name: nrdR

Synonym: NATL1_04031

Alternate gene names: 124025116

Gene position: 373024-372545 (Counterclockwise)

Preceding gene: 124025117

Following gene: 124025115

Centisome position: 20.0

GC content: 32.71

Gene sequence:

>480_bases
ATGCAGTGCCCATCTTGTCAAAACACAGACAGTCGAGTTCTTGAATCTCGTTCGGCTGATTCTGGAAGAAGCGTAAGAAG
AAGAAGGGAGTGCTTAAATTGCGACTTCCGATTTACTACTTATGAAAGAGTAGAAACAACACCAATTAATGTTTTAAAAA
GAAGCGGAGCAAAAGAATTGTTTAATCGAAGTAAAATAATTAATGGCCTAAACAGAGCCTGTGAAAAAACACTTATACAT
GGATCTAAAATTGAATTTATTGTTGACGAAATAGAGCTAGAACTCCATCAAGGAGTTTGCAAAGAGATCAAATCAATTGA
GATTGGAGAAATGGTACTTACACATTTAAAAGATATTAATGAAGTTGCTTATATCAGATTTGCATCTGTTTATAGACAAT
TTAATGGAATTAATGATTTCATGAAAACCCTTGAAGCACTAAAACCAATAAAAAAAGAACAATTGGCATCAGTTATTTAA

Upstream 100 bases:

>100_bases
TAAAAAAATATTTTAAGTCTAAAAGTAGTTTTATTTAATCTACCCCTTCTCAGAAGCCAAATAAATGTTTAAAGTTAGAT
AAATCGTTAAAAAGGGCTGC

Downstream 100 bases:

>100_bases
CTAGAAAGACCTATCAATAAAGTAGAATTTAATCTCAATTTGGTCGGCGGGCCATTTTGTATTCCTATCGCACTGTTCTA
AAAAGGCAGACCGCCATTCA

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQCPSCQNTDSRVLESRSADSGRSVRRRRECLNCDFRFTTYERVETTPINVLKRSGAKELFNRSKIINGLNRACEKTLIH
GSKIEFIVDEIELELHQGVCKEIKSIEIGEMVLTHLKDINEVAYIRFASVYRQFNGINDFMKTLEALKPIKKEQLASVI

Sequences:

>Translated_159_residues
MQCPSCQNTDSRVLESRSADSGRSVRRRRECLNCDFRFTTYERVETTPINVLKRSGAKELFNRSKIINGLNRACEKTLIH
GSKIEFIVDEIELELHQGVCKEIKSIEIGEMVLTHLKDINEVAYIRFASVYRQFNGINDFMKTLEALKPIKKEQLASVI
>Mature_159_residues
MQCPSCQNTDSRVLESRSADSGRSVRRRRECLNCDFRFTTYERVETTPINVLKRSGAKELFNRSKIINGLNRACEKTLIH
GSKIEFIVDEIELELHQGVCKEIKSIEIGEMVLTHLKDINEVAYIRFASVYRQFNGINDFMKTLEALKPIKKEQLASVI

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=140, Percent_Identity=42.1428571428571, Blast_Score=116, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_PROM1 (A2C0F7)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001014232.1
- STRING:   A2C0F7
- GeneID:   4781095
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_04031
- eggNOG:   COG1327
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- ProtClustDB:   PRK00464
- BioCyc:   PMAR167555:NATL1_04031-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 18312; Mature: 18312

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCPSCQNTDSRVLESRSADSGRSVRRRRECLNCDFRFTTYERVETTPINVLKRSGAKEL
CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHCCHHHH
FNRSKIINGLNRACEKTLIHGSKIEFIVDEIELELHQGVCKEIKSIEIGEMVLTHLKDIN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EVAYIRFASVYRQFNGINDFMKTLEALKPIKKEQLASVI
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MQCPSCQNTDSRVLESRSADSGRSVRRRRECLNCDFRFTTYERVETTPINVLKRSGAKEL
CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHCCHHHH
FNRSKIINGLNRACEKTLIHGSKIEFIVDEIELELHQGVCKEIKSIEIGEMVLTHLKDIN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EVAYIRFASVYRQFNGINDFMKTLEALKPIKKEQLASVI
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA