Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is ydjZ [C]

Identifier: 124025106

GI number: 124025106

Start: 363303

End: 363962

Strand: Reverse

Name: ydjZ [C]

Synonym: NATL1_03931

Alternate gene names: 124025106

Gene position: 363962-363303 (Counterclockwise)

Preceding gene: 124025109

Following gene: 124025105

Centisome position: 19.52

GC content: 37.12

Gene sequence:

>660_bases
TTGAAAAAAGAAAAATTACAAAAGTACCTAACTATTGCATTTTTTATAGGTGCTTTCATTTTACTTGTCTTCTTAATTCA
GACGTATGGAATTGAACCATTAAGAAGTGCCGTGAAAGAAATGGGCATTTGGGCACCTCTGGGAATTCTGATACTTCGAG
GAATTAGCGTAATCCTTCCAGCATTACCTAGCTCAGTTTACTCACTTTTAGCCGGATCATTACTTGGTTTCAAAACAGGT
TATCTAACTATTTTTATATCTGACCTAATTTTTTGCCAGATAGCATTTTTTATAGCTAGAAATTTCGGCCGAGCTCCTGT
TCGGAAATTAGTTGGAATAAAAGCCATGAAAAGAATTGAAAGTTTCAACCAAAATCAACTAGAAGGCAATTTCTTTCTAA
TGACTGGACTACTAATGACTGGACTTTTTGACTTTTTAAGCTATGCGCTAGGGATAGGGGGAACACGATGGAGGCTTTTC
ACGCCCGCTCTAATAATCAGTTTATTAATAAGTGATTCAATTATTGTTGCTGTTGGAGCAGGCGTAAGTCAGGGCGCTGG
ACTAATGTTGGGAGGTGCCTTACTTGGAATGTTTGCACTAGCAACCATTACTGGATTTAATAAAAATAAAGTCTCCGAAA
CGCAGAAAAAAAGCCTATGA

Upstream 100 bases:

>100_bases
ACGTAAATCTTTATGGATTAACTAAATCAAACACATTTTAAATAGGATAATTTAAATAGAAGTCTTTTAAGAGCTTATCC
TCTATATCTAGGAGTTCAAT

Downstream 100 bases:

>100_bases
TTTCAAAAAATTATTAAGAAATTAAATAATATAGATAACTAAAAATAAAAAATTTATATTTATTCTCTTCATATTGTTAA
ACTAAATTAGTATTAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKKEKLQKYLTIAFFIGAFILLVFLIQTYGIEPLRSAVKEMGIWAPLGILILRGISVILPALPSSVYSLLAGSLLGFKTG
YLTIFISDLIFCQIAFFIARNFGRAPVRKLVGIKAMKRIESFNQNQLEGNFFLMTGLLMTGLFDFLSYALGIGGTRWRLF
TPALIISLLISDSIIVAVGAGVSQGAGLMLGGALLGMFALATITGFNKNKVSETQKKSL

Sequences:

>Translated_219_residues
MKKEKLQKYLTIAFFIGAFILLVFLIQTYGIEPLRSAVKEMGIWAPLGILILRGISVILPALPSSVYSLLAGSLLGFKTG
YLTIFISDLIFCQIAFFIARNFGRAPVRKLVGIKAMKRIESFNQNQLEGNFFLMTGLLMTGLFDFLSYALGIGGTRWRLF
TPALIISLLISDSIIVAVGAGVSQGAGLMLGGALLGMFALATITGFNKNKVSETQKKSL
>Mature_219_residues
MKKEKLQKYLTIAFFIGAFILLVFLIQTYGIEPLRSAVKEMGIWAPLGILILRGISVILPALPSSVYSLLAGSLLGFKTG
YLTIFISDLIFCQIAFFIARNFGRAPVRKLVGIKAMKRIESFNQNQLEGNFFLMTGLLMTGLFDFLSYALGIGGTRWRLF
TPALIISLLISDSIIVAVGAGVSQGAGLMLGGALLGMFALATITGFNKNKVSETQKKSL

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23812; Mature: 23812

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEKLQKYLTIAFFIGAFILLVFLIQTYGIEPLRSAVKEMGIWAPLGILILRGISVILP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALPSSVYSLLAGSLLGFKTGYLTIFISDLIFCQIAFFIARNFGRAPVRKLVGIKAMKRIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SFNQNQLEGNFFLMTGLLMTGLFDFLSYALGIGGTRWRLFTPALIISLLISDSIIVAVGA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEECC
GVSQGAGLMLGGALLGMFALATITGFNKNKVSETQKKSL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKKEKLQKYLTIAFFIGAFILLVFLIQTYGIEPLRSAVKEMGIWAPLGILILRGISVILP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALPSSVYSLLAGSLLGFKTGYLTIFISDLIFCQIAFFIARNFGRAPVRKLVGIKAMKRIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SFNQNQLEGNFFLMTGLLMTGLFDFLSYALGIGGTRWRLFTPALIISLLISDSIIVAVGA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEECC
GVSQGAGLMLGGALLGMFALATITGFNKNKVSETQKKSL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA