| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is ydjZ [C]
Identifier: 124025106
GI number: 124025106
Start: 363303
End: 363962
Strand: Reverse
Name: ydjZ [C]
Synonym: NATL1_03931
Alternate gene names: 124025106
Gene position: 363962-363303 (Counterclockwise)
Preceding gene: 124025109
Following gene: 124025105
Centisome position: 19.52
GC content: 37.12
Gene sequence:
>660_bases TTGAAAAAAGAAAAATTACAAAAGTACCTAACTATTGCATTTTTTATAGGTGCTTTCATTTTACTTGTCTTCTTAATTCA GACGTATGGAATTGAACCATTAAGAAGTGCCGTGAAAGAAATGGGCATTTGGGCACCTCTGGGAATTCTGATACTTCGAG GAATTAGCGTAATCCTTCCAGCATTACCTAGCTCAGTTTACTCACTTTTAGCCGGATCATTACTTGGTTTCAAAACAGGT TATCTAACTATTTTTATATCTGACCTAATTTTTTGCCAGATAGCATTTTTTATAGCTAGAAATTTCGGCCGAGCTCCTGT TCGGAAATTAGTTGGAATAAAAGCCATGAAAAGAATTGAAAGTTTCAACCAAAATCAACTAGAAGGCAATTTCTTTCTAA TGACTGGACTACTAATGACTGGACTTTTTGACTTTTTAAGCTATGCGCTAGGGATAGGGGGAACACGATGGAGGCTTTTC ACGCCCGCTCTAATAATCAGTTTATTAATAAGTGATTCAATTATTGTTGCTGTTGGAGCAGGCGTAAGTCAGGGCGCTGG ACTAATGTTGGGAGGTGCCTTACTTGGAATGTTTGCACTAGCAACCATTACTGGATTTAATAAAAATAAAGTCTCCGAAA CGCAGAAAAAAAGCCTATGA
Upstream 100 bases:
>100_bases ACGTAAATCTTTATGGATTAACTAAATCAAACACATTTTAAATAGGATAATTTAAATAGAAGTCTTTTAAGAGCTTATCC TCTATATCTAGGAGTTCAAT
Downstream 100 bases:
>100_bases TTTCAAAAAATTATTAAGAAATTAAATAATATAGATAACTAAAAATAAAAAATTTATATTTATTCTCTTCATATTGTTAA ACTAAATTAGTATTAAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKKEKLQKYLTIAFFIGAFILLVFLIQTYGIEPLRSAVKEMGIWAPLGILILRGISVILPALPSSVYSLLAGSLLGFKTG YLTIFISDLIFCQIAFFIARNFGRAPVRKLVGIKAMKRIESFNQNQLEGNFFLMTGLLMTGLFDFLSYALGIGGTRWRLF TPALIISLLISDSIIVAVGAGVSQGAGLMLGGALLGMFALATITGFNKNKVSETQKKSL
Sequences:
>Translated_219_residues MKKEKLQKYLTIAFFIGAFILLVFLIQTYGIEPLRSAVKEMGIWAPLGILILRGISVILPALPSSVYSLLAGSLLGFKTG YLTIFISDLIFCQIAFFIARNFGRAPVRKLVGIKAMKRIESFNQNQLEGNFFLMTGLLMTGLFDFLSYALGIGGTRWRLF TPALIISLLISDSIIVAVGAGVSQGAGLMLGGALLGMFALATITGFNKNKVSETQKKSL >Mature_219_residues MKKEKLQKYLTIAFFIGAFILLVFLIQTYGIEPLRSAVKEMGIWAPLGILILRGISVILPALPSSVYSLLAGSLLGFKTG YLTIFISDLIFCQIAFFIARNFGRAPVRKLVGIKAMKRIESFNQNQLEGNFFLMTGLLMTGLFDFLSYALGIGGTRWRLF TPALIISLLISDSIIVAVGAGVSQGAGLMLGGALLGMFALATITGFNKNKVSETQKKSL
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23812; Mature: 23812
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEKLQKYLTIAFFIGAFILLVFLIQTYGIEPLRSAVKEMGIWAPLGILILRGISVILP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ALPSSVYSLLAGSLLGFKTGYLTIFISDLIFCQIAFFIARNFGRAPVRKLVGIKAMKRIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SFNQNQLEGNFFLMTGLLMTGLFDFLSYALGIGGTRWRLFTPALIISLLISDSIIVAVGA HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEECC GVSQGAGLMLGGALLGMFALATITGFNKNKVSETQKKSL CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MKKEKLQKYLTIAFFIGAFILLVFLIQTYGIEPLRSAVKEMGIWAPLGILILRGISVILP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ALPSSVYSLLAGSLLGFKTGYLTIFISDLIFCQIAFFIARNFGRAPVRKLVGIKAMKRIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SFNQNQLEGNFFLMTGLLMTGLFDFLSYALGIGGTRWRLFTPALIISLLISDSIIVAVGA HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEECC GVSQGAGLMLGGALLGMFALATITGFNKNKVSETQKKSL CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA