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The map label for this gene is cpeS [H]

Identifier: 124025104

GI number: 124025104

Start: 361834

End: 362319

Strand: Reverse

Name: cpeS [H]

Synonym: NATL1_03911

Alternate gene names: 124025104

Gene position: 362319-361834 (Counterclockwise)

Preceding gene: 124025105

Following gene: 124025103

Centisome position: 19.43

GC content: 30.45

Gene sequence:

>486_bases
ATGAGAAGCGGACATTCTCTAGCATTTCAAGAATTTGAAGAAATAAGAAGTAAAATAAAAATATCACCTTCTAAACCTAA
AGACGCACGAGTTATTAAATTTTTAAAAGATAATTTAATATCTACTAAAGCAGTAAACAAAGCATTCCTAATAAGTTGGG
AAGCAAAAAGTGAATGGGGTGAAGAGAATCAAAATGGAAACTCTTCTGGTGAAAGTATAGTCGTTCCGATAGAAGTTTCT
AAAACAGAAGGAAAAATAGTTAGGAGCGTTGGATATACTGAAGCAATTCAAGTAGTGTCATTATATAAAATTCTTGGTGA
TGGAACTCTAATTATTTATTCAGAATATAGTCATATTAGTACAGAGGAAAGAATATGGTTTATCTCAAACAATGTAAGGA
GTAGATCTTCTGTTACAAGATCACTAGATTCATTAGCAATCCTTCAAACATCTTATGCATCTGAGATTCGTTCTTTAAAA
AATTAA

Upstream 100 bases:

>100_bases
TACAATTATTTAATCTTCTAAAAATAAATTAATAGCAATCTAATTAAAGTAGATGAATATTAAAGAATTTTTCTTAAAAA
GTGTTGGGGAATGGAATTCA

Downstream 100 bases:

>100_bases
ATAATATAAAAGATGAAAAAAAAACCTACCTTAGAATTTGCAAAGATAGTTTCAGGCGTATTTAGTAATAAGGAACAAGC
TTTAAATAATCCAAAAAAGT

Product: phycoerythrin linker protein CpeS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRSGHSLAFQEFEEIRSKIKISPSKPKDARVIKFLKDNLISTKAVNKAFLISWEAKSEWGEENQNGNSSGESIVVPIEVS
KTEGKIVRSVGYTEAIQVVSLYKILGDGTLIIYSEYSHISTEERIWFISNNVRSRSSVTRSLDSLAILQTSYASEIRSLK
N

Sequences:

>Translated_161_residues
MRSGHSLAFQEFEEIRSKIKISPSKPKDARVIKFLKDNLISTKAVNKAFLISWEAKSEWGEENQNGNSSGESIVVPIEVS
KTEGKIVRSVGYTEAIQVVSLYKILGDGTLIIYSEYSHISTEERIWFISNNVRSRSSVTRSLDSLAILQTSYASEIRSLK
N
>Mature_161_residues
MRSGHSLAFQEFEEIRSKIKISPSKPKDARVIKFLKDNLISTKAVNKAFLISWEAKSEWGEENQNGNSSGESIVVPIEVS
KTEGKIVRSVGYTEAIQVVSLYKILGDGTLIIYSEYSHISTEERIWFISNNVRSRSSVTRSLDSLAILQTSYASEIRSLK
N

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 18089; Mature: 18089

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGHSLAFQEFEEIRSKIKISPSKPKDARVIKFLKDNLISTKAVNKAFLISWEAKSEWG
CCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC
EENQNGNSSGESIVVPIEVSKTEGKIVRSVGYTEAIQVVSLYKILGDGTLIIYSEYSHIS
CCCCCCCCCCCEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
TEERIWFISNNVRSRSSVTRSLDSLAILQTSYASEIRSLKN
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSGHSLAFQEFEEIRSKIKISPSKPKDARVIKFLKDNLISTKAVNKAFLISWEAKSEWG
CCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC
EENQNGNSSGESIVVPIEVSKTEGKIVRSVGYTEAIQVVSLYKILGDGTLIIYSEYSHIS
CCCCCCCCCCCEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
TEERIWFISNNVRSRSSVTRSLDSLAILQTSYASEIRSLKN
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA