Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124024706
Identifier: 124024706
GI number: 124024706
Start: 2672542
End: 2674059
Strand: Reverse
Name: 124024706
Synonym: P9303_30181
Alternate gene names: NA
Gene position: 2674059-2672542 (Counterclockwise)
Preceding gene: 124024707
Following gene: 124024705
Centisome position: 99.68
GC content: 51.52
Gene sequence:
>1518_bases ATGATGTTTTTTCGTTCCCGTCTTTGGCTGCTTGCAATCAGTTTTGGAGCAGGGCTTGGACTTGTTCCAAGCTCTGCTCC TGCACTTGAACGCTTGGTGTTTGATCTGCCTGTGCTGGAAAGTCAGATTGAGTTTGAGCTTGGCGCTTCTCAGAGCGCTG GCGATCTAATTGATGCCAATCCCGATTTTGTGGAGTTGGATCGGGCTACGGATGGTGCTTTTGTGCGACTTCTCAATCAG GTCTTTAACGCTCCCCTGCCAGCGCAGATTGAGAAGGTGGTTGAGAAGTCTGTCGGGCAGCCTCTTTTGGAGCAGGCTCT GATCGCAGTATCCAAGTTGGTTCAAGTTGAGGGGTTGCCCAAAGACACCAGTGGAAGGATGTTGCTTGAGGCGCTTTCGC GTGCTTCCAAGAGTGGTCAGCCAACTGTGCTTGGTTTGTTGCGACAAATCCCTGGTCAAGCTGCATCCATCAACTTGTCG AAATTGGCCAGCTATGTCTCACGGCTACAACGTAATCAGCTAGCAGCAAATCTGCTTGTGGAGAAAGAGGCTTCTGTTCA GATTAAACCTGGATTACGCATGCCGCTTAGCGGGTTGTGGTTAAGTCAGCAAGTTGATTTTCAGGCTTCCCATCGCTCTA AACCGATACGGGTGGTGGTGATACAACCAAAGTCTCGCTCAAATGGTCGCTTGGTGGTCATTTCACATGGGCTTTGGGAG TCTCCGAGAGATCTTCAGGGTTGGGCTGAATATCTTTCTGCTAACGGTTATACGGTGTTGCTGCCGGAGCATCAGGGCAG TGATGCTGATCAGCAGAAGGCGATGTTGGCGGGGGATCAACCTCCACCGGGACCTCAAGAGTTGCGTCTTCGTGCGATGG ATGTGACTGCGATGCTCTCTGCTGTTGAGTCAGGTGGTTTGTTGTCAAGACTTTCCCTCAATACAGATGAGGTCGCTGTT GTTGGTCATTCATGGGGGGCGACTACAGCGATTCAATTGGCTGGGGCACGCTCAACGGATGTGAAGCTCTCTGCTCGTTG TCATAACCAGGATGACCCTGAGCGCAATATCAGCTGGATACTGCAGTGCAGTTGGCTTTCCAAAATCAATGAGTCTTCTT TTGAAGACTCACGGGTCAAGGCAGTTGTGGCGGTGAGTCCGCCGTTACGTCTTCTATTTGATCCCAGCAGAACTTCAGTT TTGACGGCCAAGGTTTTGTTGGTTAGTGGCACTCGTGATTGGGTGGTTCCTCCCGTGCCTGAGGCTCTGATGCCCATGCG TGATAGTGGTGCTTTGGAGTTTGGCCATCGCTTGGTGCTTGCCCAAGATGGTGGTCACTTCAACTTGATGGCACCTGCAA ATCAGCCTCAGCCGGCGATTTTGGCGCCCCTCATTCTTGCTTGGATTAATGAACAGCTTGCAAATCCTGGTGTTGTCACC TTCAGTGGCGGCGGTTGGGGTGATGCCGTGCATCCTTTAGTGGATGTGACTGATGCGGCTCTGAATTTGTATCGCTGA
Upstream 100 bases:
>100_bases CTCCAGAAGAGGTTGCATCCCATCCCACTAGCCATACGGGGCATTATCTCAAGAAGGTGTTAGCGAAGCATCCTCCTGAG ACTGTGTCTGTTGCAGCTTG
Downstream 100 bases:
>100_bases GGTTTTTTGGCTTGGCTTGTTGCGAGCAAGAGGCTTCATTATTCTGTCTTTGAGGTTTGTATTTCTCAACGATTCGGTCT AGGCTTTTGCTCTTTAAAGA
Product: esterase/lipase/thioesterase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MMFFRSRLWLLAISFGAGLGLVPSSAPALERLVFDLPVLESQIEFELGASQSAGDLIDANPDFVELDRATDGAFVRLLNQ VFNAPLPAQIEKVVEKSVGQPLLEQALIAVSKLVQVEGLPKDTSGRMLLEALSRASKSGQPTVLGLLRQIPGQAASINLS KLASYVSRLQRNQLAANLLVEKEASVQIKPGLRMPLSGLWLSQQVDFQASHRSKPIRVVVIQPKSRSNGRLVVISHGLWE SPRDLQGWAEYLSANGYTVLLPEHQGSDADQQKAMLAGDQPPPGPQELRLRAMDVTAMLSAVESGGLLSRLSLNTDEVAV VGHSWGATTAIQLAGARSTDVKLSARCHNQDDPERNISWILQCSWLSKINESSFEDSRVKAVVAVSPPLRLLFDPSRTSV LTAKVLLVSGTRDWVVPPVPEALMPMRDSGALEFGHRLVLAQDGGHFNLMAPANQPQPAILAPLILAWINEQLANPGVVT FSGGGWGDAVHPLVDVTDAALNLYR
Sequences:
>Translated_505_residues MMFFRSRLWLLAISFGAGLGLVPSSAPALERLVFDLPVLESQIEFELGASQSAGDLIDANPDFVELDRATDGAFVRLLNQ VFNAPLPAQIEKVVEKSVGQPLLEQALIAVSKLVQVEGLPKDTSGRMLLEALSRASKSGQPTVLGLLRQIPGQAASINLS KLASYVSRLQRNQLAANLLVEKEASVQIKPGLRMPLSGLWLSQQVDFQASHRSKPIRVVVIQPKSRSNGRLVVISHGLWE SPRDLQGWAEYLSANGYTVLLPEHQGSDADQQKAMLAGDQPPPGPQELRLRAMDVTAMLSAVESGGLLSRLSLNTDEVAV VGHSWGATTAIQLAGARSTDVKLSARCHNQDDPERNISWILQCSWLSKINESSFEDSRVKAVVAVSPPLRLLFDPSRTSV LTAKVLLVSGTRDWVVPPVPEALMPMRDSGALEFGHRLVLAQDGGHFNLMAPANQPQPAILAPLILAWINEQLANPGVVT FSGGGWGDAVHPLVDVTDAALNLYR >Mature_505_residues MMFFRSRLWLLAISFGAGLGLVPSSAPALERLVFDLPVLESQIEFELGASQSAGDLIDANPDFVELDRATDGAFVRLLNQ VFNAPLPAQIEKVVEKSVGQPLLEQALIAVSKLVQVEGLPKDTSGRMLLEALSRASKSGQPTVLGLLRQIPGQAASINLS KLASYVSRLQRNQLAANLLVEKEASVQIKPGLRMPLSGLWLSQQVDFQASHRSKPIRVVVIQPKSRSNGRLVVISHGLWE SPRDLQGWAEYLSANGYTVLLPEHQGSDADQQKAMLAGDQPPPGPQELRLRAMDVTAMLSAVESGGLLSRLSLNTDEVAV VGHSWGATTAIQLAGARSTDVKLSARCHNQDDPERNISWILQCSWLSKINESSFEDSRVKAVVAVSPPLRLLFDPSRTSV LTAKVLLVSGTRDWVVPPVPEALMPMRDSGALEFGHRLVLAQDGGHFNLMAPANQPQPAILAPLILAWINEQLANPGVVT FSGGGWGDAVHPLVDVTDAALNLYR
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54555; Mature: 54555
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFFRSRLWLLAISFGAGLGLVPSSAPALERLVFDLPVLESQIEFELGASQSAGDLIDAN CCCHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHEEEECCCCCCCCCCCCC PDFVELDRATDGAFVRLLNQVFNAPLPAQIEKVVEKSVGQPLLEQALIAVSKLVQVEGLP CCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC KDTSGRMLLEALSRASKSGQPTVLGLLRQIPGQAASINLSKLASYVSRLQRNQLAANLLV CCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEE EKEASVQIKPGLRMPLSGLWLSQQVDFQASHRSKPIRVVVIQPKSRSNGRLVVISHGLWE ECCCCEEECCCCCCCCCCCEECCCCCCCHHCCCCCEEEEEECCCCCCCCEEEEEECCCCC SPRDLQGWAEYLSANGYTVLLPEHQGSDADQQKAMLAGDQPPPGPQELRLRAMDVTAMLS CCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHEEEHHHHHHHHH AVESGGLLSRLSLNTDEVAVVGHSWGATTAIQLAGARSTDVKLSARCHNQDDPERNISWI HHHCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEE LQCSWLSKINESSFEDSRVKAVVAVSPPLRLLFDPSRTSVLTAKVLLVSGTRDWVVPPVP EEEHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCC EALMPMRDSGALEFGHRLVLAQDGGHFNLMAPANQPQPAILAPLILAWINEQLANPGVVT HHHCCCCCCCCEECCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE FSGGGWGDAVHPLVDVTDAALNLYR ECCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMFFRSRLWLLAISFGAGLGLVPSSAPALERLVFDLPVLESQIEFELGASQSAGDLIDAN CCCHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHEEEECCCCCCCCCCCCC PDFVELDRATDGAFVRLLNQVFNAPLPAQIEKVVEKSVGQPLLEQALIAVSKLVQVEGLP CCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC KDTSGRMLLEALSRASKSGQPTVLGLLRQIPGQAASINLSKLASYVSRLQRNQLAANLLV CCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEE EKEASVQIKPGLRMPLSGLWLSQQVDFQASHRSKPIRVVVIQPKSRSNGRLVVISHGLWE ECCCCEEECCCCCCCCCCCEECCCCCCCHHCCCCCEEEEEECCCCCCCCEEEEEECCCCC SPRDLQGWAEYLSANGYTVLLPEHQGSDADQQKAMLAGDQPPPGPQELRLRAMDVTAMLS CCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHEEEHHHHHHHHH AVESGGLLSRLSLNTDEVAVVGHSWGATTAIQLAGARSTDVKLSARCHNQDDPERNISWI HHHCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEE LQCSWLSKINESSFEDSRVKAVVAVSPPLRLLFDPSRTSVLTAKVLLVSGTRDWVVPPVP EEEHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCC EALMPMRDSGALEFGHRLVLAQDGGHFNLMAPANQPQPAILAPLILAWINEQLANPGVVT HHHCCCCCCCCEECCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE FSGGGWGDAVHPLVDVTDAALNLYR ECCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA