Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is znuB [C]
Identifier: 124022819
GI number: 124022819
Start: 995664
End: 996518
Strand: Reverse
Name: znuB [C]
Synonym: P9303_11121
Alternate gene names: 124022819
Gene position: 996518-995664 (Counterclockwise)
Preceding gene: 124022820
Following gene: 124022818
Centisome position: 37.15
GC content: 44.09
Gene sequence:
>855_bases ATGCAACGTGCAATGTTGGGTGGTCTAATCACCGGATCATTAGGTGGATTGTTGGGCAGTATTGCTGTTCTCAGACAGTT ATCATTTTTCAGTGATGCGCTAGGCCATTCCGCCTTACTGGGAATCACATTAGGGATCATTCTTGGAGTCAACCCCATGT TGGTCTTGATTCCATTTGCGATGGTGTTTGCACTGACGGTCAATCAACTTGTCGAACGAAGTTCTTTACCGACCGATGCG CTTCTCAATATTGTGTATTCAAGTTCTCTGGCGGCAGCAATTTTAGCTTTAAGCTTAGTAGAAACTTACCGAGGTGGAAT CCGCCAGTTACTATTTGGCGATATTCTTGGGGTTAGCAATATTGATATGATTGTAAGTATCATACTATTAATTGTTGCTT TGATTTATATCGCCACTTCAATACGTTCACAGGTTCTACTGACTTTGAATACTGAGCTTGCAAGTGTCGCAGGTGTACAA ACACGTTGGCATCGGATGGCATTTATTGTTTTACTTGCAGTGGTTGTTGCTGTATCGATTAAGGCAGTAGGCGTCTTGTT GATCAGCGCCTTCGTTGTCATACCTGCTTGTGCCAGCCGTTTGTTGAGCCGACATTTCACTCTCTACATGCTTGTTTCAG CCGCTCTTGGTGGTGGATGTGCATTGGTGGGTTTGCTTGCATCCGGAATCACCAATTTGCCATCAGGTCCATCTGTTGTG ATGGTTCAATTTATTGTTTTTTTGATAGCGCTCTCCTTCAGCAGCCGGCCATTTAGAAAGAAGAGAGGGTTCGCTCAGAC AGGATTACGCCAAATTTCTGATGCAAAAAGAAACGACCCTCGGACTTCTTTCTAA
Upstream 100 bases:
>100_bases GAGCATTTGATCGACCTTTACGGACATAACGTCGTTCCTTATCGACATCATTGTCGTGAGTGATCCTAACACGATTGTAG AGATTTTAAGGGAACCGTTC
Downstream 100 bases:
>100_bases CATTACCTGCAGAGAATGTAGAGCTTGTCTGCGAAGTTCGTTATGTAAATTGATATCTGGGTTTCAATTTACAGCATTTT GCATCTCAGGAATGCAGACT
Product: hypothetical protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MQRAMLGGLITGSLGGLLGSIAVLRQLSFFSDALGHSALLGITLGIILGVNPMLVLIPFAMVFALTVNQLVERSSLPTDA LLNIVYSSSLAAAILALSLVETYRGGIRQLLFGDILGVSNIDMIVSIILLIVALIYIATSIRSQVLLTLNTELASVAGVQ TRWHRMAFIVLLAVVVAVSIKAVGVLLISAFVVIPACASRLLSRHFTLYMLVSAALGGGCALVGLLASGITNLPSGPSVV MVQFIVFLIALSFSSRPFRKKRGFAQTGLRQISDAKRNDPRTSF
Sequences:
>Translated_284_residues MQRAMLGGLITGSLGGLLGSIAVLRQLSFFSDALGHSALLGITLGIILGVNPMLVLIPFAMVFALTVNQLVERSSLPTDA LLNIVYSSSLAAAILALSLVETYRGGIRQLLFGDILGVSNIDMIVSIILLIVALIYIATSIRSQVLLTLNTELASVAGVQ TRWHRMAFIVLLAVVVAVSIKAVGVLLISAFVVIPACASRLLSRHFTLYMLVSAALGGGCALVGLLASGITNLPSGPSVV MVQFIVFLIALSFSSRPFRKKRGFAQTGLRQISDAKRNDPRTSF >Mature_284_residues MQRAMLGGLITGSLGGLLGSIAVLRQLSFFSDALGHSALLGITLGIILGVNPMLVLIPFAMVFALTVNQLVERSSLPTDA LLNIVYSSSLAAAILALSLVETYRGGIRQLLFGDILGVSNIDMIVSIILLIVALIYIATSIRSQVLLTLNTELASVAGVQ TRWHRMAFIVLLAVVVAVSIKAVGVLLISAFVVIPACASRLLSRHFTLYMLVSAALGGGCALVGLLASGITNLPSGPSVV MVQFIVFLIALSFSSRPFRKKRGFAQTGLRQISDAKRNDPRTSF
Specific function: Involved In The High-Affinity Zinc Uptake Transport System. [C]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=253, Percent_Identity=30.0395256916996, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 30036; Mature: 30036
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRAMLGGLITGSLGGLLGSIAVLRQLSFFSDALGHSALLGITLGIILGVNPMLVLIPFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH MVFALTVNQLVERSSLPTDALLNIVYSSSLAAAILALSLVETYRGGIRQLLFGDILGVSN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IDMIVSIILLIVALIYIATSIRSQVLLTLNTELASVAGVQTRWHRMAFIVLLAVVVAVSI HHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAVGVLLISAFVVIPACASRLLSRHFTLYMLVSAALGGGCALVGLLASGITNLPSGPSVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHH MVQFIVFLIALSFSSRPFRKKRGFAQTGLRQISDAKRNDPRTSF HHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQRAMLGGLITGSLGGLLGSIAVLRQLSFFSDALGHSALLGITLGIILGVNPMLVLIPFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH MVFALTVNQLVERSSLPTDALLNIVYSSSLAAAILALSLVETYRGGIRQLLFGDILGVSN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IDMIVSIILLIVALIYIATSIRSQVLLTLNTELASVAGVQTRWHRMAFIVLLAVVVAVSI HHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAVGVLLISAFVVIPACASRLLSRHFTLYMLVSAALGGGCALVGLLASGITNLPSGPSVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHH MVQFIVFLIALSFSSRPFRKKRGFAQTGLRQISDAKRNDPRTSF HHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7927711 [H]