Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022725
Identifier: 124022725
GI number: 124022725
Start: 928728
End: 929330
Strand: Reverse
Name: 124022725
Synonym: P9303_10181
Alternate gene names: NA
Gene position: 929330-928728 (Counterclockwise)
Preceding gene: 124022726
Following gene: 124022723
Centisome position: 34.64
GC content: 46.27
Gene sequence:
>603_bases ATGACCAAAGAAACAACCCCGGACTTTTTCGAAGACAGACGACGCCTGGCGATGGAGCTCCGCGATGCCCTGAAAAGCCT GCGCTCGTTATTTGTAGCGGCTGTCTCACTTGTGATCACCATTGCAGGATGGAGGCCACGATCAGAAACTTCTAAATCAA CGACTAGCAACGATTATCAGACCCCTCAAATGCAAGCAATTCCTGCCTCTTCATATCCAATCCTTACCTCTCGATCGATT CATGACTCACAACCAATATATAACTCGCGAACAAAACTCAACTCAGATCTAATCCCTACCTCGCAAACGCGGTTTGCCTG GAAGGCAATTCAGGCTTCCCAAAAAATCACACAGCCAGAGCATCGTAAAGTTAACAAACAAGAAATTGCCAAAGATCTCG CCTACACAGTGATGGCGGCAATCAGCACGATCGCCCTAGTCGTTGGTGTATCTAGGCTTGAGCCAATTGCTGAAAGGCTT GAGCCGATTGCTCGTTGGGCTAAGTCACAGAATGAATGTATTGAATCTACTTCCAACAATGATGGAATGAATAGAACTGA TCTTCCGATAAAAGTGATGAGCTGTAATGGTGGCCACGAATAA
Upstream 100 bases:
>100_bases TGATGTCTTACAATTGAAGAAATACAGGCTTTTCTCCTGAAGAGACAAATCGACGTTCAAAGCGACTACTCACAAAGGAT GAAATAAGCTAAAAGGAGGC
Downstream 100 bases:
>100_bases ATGTAAAATCAACTATCTATCTTTACAGAATAAGCACTCCTCAATAGAACGGCTAAAACTACAACAAACTATTTACAGAC TGATCAAGCAAAGCAATACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTKETTPDFFEDRRRLAMELRDALKSLRSLFVAAVSLVITIAGWRPRSETSKSTTSNDYQTPQMQAIPASSYPILTSRSI HDSQPIYNSRTKLNSDLIPTSQTRFAWKAIQASQKITQPEHRKVNKQEIAKDLAYTVMAAISTIALVVGVSRLEPIAERL EPIARWAKSQNECIESTSNNDGMNRTDLPIKVMSCNGGHE
Sequences:
>Translated_200_residues MTKETTPDFFEDRRRLAMELRDALKSLRSLFVAAVSLVITIAGWRPRSETSKSTTSNDYQTPQMQAIPASSYPILTSRSI HDSQPIYNSRTKLNSDLIPTSQTRFAWKAIQASQKITQPEHRKVNKQEIAKDLAYTVMAAISTIALVVGVSRLEPIAERL EPIARWAKSQNECIESTSNNDGMNRTDLPIKVMSCNGGHE >Mature_199_residues TKETTPDFFEDRRRLAMELRDALKSLRSLFVAAVSLVITIAGWRPRSETSKSTTSNDYQTPQMQAIPASSYPILTSRSIH DSQPIYNSRTKLNSDLIPTSQTRFAWKAIQASQKITQPEHRKVNKQEIAKDLAYTVMAAISTIALVVGVSRLEPIAERLE PIARWAKSQNECIESTSNNDGMNRTDLPIKVMSCNGGHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22424; Mature: 22293
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKETTPDFFEDRRRLAMELRDALKSLRSLFVAAVSLVITIAGWRPRSETSKSTTSNDYQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC TPQMQAIPASSYPILTSRSIHDSQPIYNSRTKLNSDLIPTSQTRFAWKAIQASQKITQPE CCCCEECCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCH HRKVNKQEIAKDLAYTVMAAISTIALVVGVSRLEPIAERLEPIARWAKSQNECIESTSNN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGMNRTDLPIKVMSCNGGHE CCCCCCCCCEEEEECCCCCC >Mature Secondary Structure TKETTPDFFEDRRRLAMELRDALKSLRSLFVAAVSLVITIAGWRPRSETSKSTTSNDYQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC TPQMQAIPASSYPILTSRSIHDSQPIYNSRTKLNSDLIPTSQTRFAWKAIQASQKITQPE CCCCEECCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCH HRKVNKQEIAKDLAYTVMAAISTIALVVGVSRLEPIAERLEPIARWAKSQNECIESTSNN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGMNRTDLPIKVMSCNGGHE CCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA