Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
---|---|
Accession | NC_008820 |
Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124022280
Identifier: 124022280
GI number: 124022280
Start: 550309
End: 550965
Strand: Direct
Name: 124022280
Synonym: P9303_05701
Alternate gene names: NA
Gene position: 550309-550965 (Clockwise)
Preceding gene: 124022276
Following gene: 124022281
Centisome position: 20.51
GC content: 56.77
Gene sequence:
>657_bases ATGACGTTGTCCCAAGCATTGGAGTCGGGCAATCCTCCAGAGCAGCTGAGCGGGCCCCTCTGGGTTTTCTCACCCAATCG AGACTGTGACGGTGGGACAGCATGGTGGCTGGGATGTGAACCCGAACCCGTCTTAATCGACTGTCCGCCTTTAACGACAA CCACTCTTGAGGCCCTAAAACAGCTCGCCTCGGGGCGCACGGCCCTGATCTTGCTGACCAGTCGAGAGGGGCATGGCAGG GTGCGTGCGCTTCAGGATGCCCTCGGATGGCCTGTATTGGTGCAGGAGCAGGAGGCTTATCTCCTGCCCGGGCTGACATC GCTGGACAGCTTTGTTGATCAACACACCACCGCTGCGGGGCTGCGGCTGCTTTGGACGCCTGGGCCAACACCAGGGAGCT GTGTGGTTTTTGCTCCTGATCCTTGGAACGTACTTTTTTGTGGACGTTTGTTGATTCCTGTCGCGTTTGTTCAATTGGCT CCATTGCCAAATCGGCGGACTTTTTATTGGCCTCGCCAGCTCAGAAGCTTGCAAAAATTGCGCCAATGGATTCCTTCAGA TTCAAGGCCTGCACTGGCTTCTGGTGCTCCCCTTGGGGCCCTCCGAGGAGAGAAATTGGCCCCATGGGATGCCTGGAAAT TGCAGGTAAATCAGTGA
Upstream 100 bases:
>100_bases GGCCAAGGAGTGCCGAGATGCATCTTGCTTACAGCTGTGTCTGCGGCGAGGCAGAAAGCATTGGGCACAAGCGAAGAGGT TCAGCCCGTTTCACAATGTC
Downstream 100 bases:
>100_bases ATCAAATTGTTCAGTTTTCGTATAAAGCGTTGCGCCACGGTCCCTTTCGGTTGCCGGCAGCGGCTTGAGTCCATACGATT AGCGCGAATCGGGATAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTLSQALESGNPPEQLSGPLWVFSPNRDCDGGTAWWLGCEPEPVLIDCPPLTTTTLEALKQLASGRTALILLTSREGHGR VRALQDALGWPVLVQEQEAYLLPGLTSLDSFVDQHTTAAGLRLLWTPGPTPGSCVVFAPDPWNVLFCGRLLIPVAFVQLA PLPNRRTFYWPRQLRSLQKLRQWIPSDSRPALASGAPLGALRGEKLAPWDAWKLQVNQ
Sequences:
>Translated_218_residues MTLSQALESGNPPEQLSGPLWVFSPNRDCDGGTAWWLGCEPEPVLIDCPPLTTTTLEALKQLASGRTALILLTSREGHGR VRALQDALGWPVLVQEQEAYLLPGLTSLDSFVDQHTTAAGLRLLWTPGPTPGSCVVFAPDPWNVLFCGRLLIPVAFVQLA PLPNRRTFYWPRQLRSLQKLRQWIPSDSRPALASGAPLGALRGEKLAPWDAWKLQVNQ >Mature_217_residues TLSQALESGNPPEQLSGPLWVFSPNRDCDGGTAWWLGCEPEPVLIDCPPLTTTTLEALKQLASGRTALILLTSREGHGRV RALQDALGWPVLVQEQEAYLLPGLTSLDSFVDQHTTAAGLRLLWTPGPTPGSCVVFAPDPWNVLFCGRLLIPVAFVQLAP LPNRRTFYWPRQLRSLQKLRQWIPSDSRPALASGAPLGALRGEKLAPWDAWKLQVNQ
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23962; Mature: 23831
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSQALESGNPPEQLSGPLWVFSPNRDCDGGTAWWLGCEPEPVLIDCPPLTTTTLEALK CCHHHHHHCCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHH QLASGRTALILLTSREGHGRVRALQDALGWPVLVQEQEAYLLPGLTSLDSFVDQHTTAAG HHHCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHC LRLLWTPGPTPGSCVVFAPDPWNVLFCGRLLIPVAFVQLAPLPNRRTFYWPRQLRSLQKL EEEEECCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHH RQWIPSDSRPALASGAPLGALRGEKLAPWDAWKLQVNQ HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure TLSQALESGNPPEQLSGPLWVFSPNRDCDGGTAWWLGCEPEPVLIDCPPLTTTTLEALK CHHHHHHCCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHH QLASGRTALILLTSREGHGRVRALQDALGWPVLVQEQEAYLLPGLTSLDSFVDQHTTAAG HHHCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHC LRLLWTPGPTPGSCVVFAPDPWNVLFCGRLLIPVAFVQLAPLPNRRTFYWPRQLRSLQKL EEEEECCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHH RQWIPSDSRPALASGAPLGALRGEKLAPWDAWKLQVNQ HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA