Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022113
Identifier: 124022113
GI number: 124022113
Start: 404763
End: 405137
Strand: Reverse
Name: 124022113
Synonym: P9303_04031
Alternate gene names: NA
Gene position: 405137-404763 (Counterclockwise)
Preceding gene: 124022115
Following gene: 124022111
Centisome position: 15.1
GC content: 54.67
Gene sequence:
>375_bases ATGTCTCTTCGCACAATCTCACTAGTCATAGCCCTTAGTGGAACTGCCTGCTTGGCAGATCTAGCGACACCGACCCACGC CCAAGACCAGCTTCCTTCCTCCCAGATCCGCGCCCTCAACCTGGCCCGTGGCACCGCGGTCAAAGAAAACGGCGGTCTTT CGGTTTACCAACCGGCGCCTTGCATGTTTGCCACGAGCAATGGTGGTAACGATTGCCTGATCAGAAACACCATCAATGGC TACACCTATAGCTTCTTAGGTGGGGCCCCAGGCTGGTCGGAATATGGCAATGAACCGACCACAGAAACCGTCATTCAGAT TGCCCCAGACGGAAGGTCTGTCAATCAGATCATTTACAACGGCCCCCCTCGTTAA
Upstream 100 bases:
>100_bases CCCATTGCGTCACCCTCGCCAACCATAAAAACCTTCGGATTTTGCACAGACCAAGCGACGGATTCTTGCTATTAGATGGG TTGAGCCTTCGAGCAAAGCG
Downstream 100 bases:
>100_bases CAGTCGACTAACTGCTGCAGGGCCCCTTGCCATTGCTCAGGCAGGGGGCAGACCTCTCGACAGGTCAGGCTCATGGCGAT GTGCTTTTCAACGTAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSLRTISLVIALSGTACLADLATPTHAQDQLPSSQIRALNLARGTAVKENGGLSVYQPAPCMFATSNGGNDCLIRNTING YTYSFLGGAPGWSEYGNEPTTETVIQIAPDGRSVNQIIYNGPPR
Sequences:
>Translated_124_residues MSLRTISLVIALSGTACLADLATPTHAQDQLPSSQIRALNLARGTAVKENGGLSVYQPAPCMFATSNGGNDCLIRNTING YTYSFLGGAPGWSEYGNEPTTETVIQIAPDGRSVNQIIYNGPPR >Mature_123_residues SLRTISLVIALSGTACLADLATPTHAQDQLPSSQIRALNLARGTAVKENGGLSVYQPAPCMFATSNGGNDCLIRNTINGY TYSFLGGAPGWSEYGNEPTTETVIQIAPDGRSVNQIIYNGPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13072; Mature: 12941
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRTISLVIALSGTACLADLATPTHAQDQLPSSQIRALNLARGTAVKENGGLSVYQPAP CCCEEEEEEEEECCCCEEHHCCCCCCCCCCCCCCHHEEEECCCCCEEECCCCEEEECCCC CMFATSNGGNDCLIRNTINGYTYSFLGGAPGWSEYGNEPTTETVIQIAPDGRSVNQIIYN EEEEECCCCCEEEEEECCCCEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEC GPPR CCCC >Mature Secondary Structure SLRTISLVIALSGTACLADLATPTHAQDQLPSSQIRALNLARGTAVKENGGLSVYQPAP CCEEEEEEEEECCCCEEHHCCCCCCCCCCCCCCHHEEEECCCCCEEECCCCEEEECCCC CMFATSNGGNDCLIRNTINGYTYSFLGGAPGWSEYGNEPTTETVIQIAPDGRSVNQIIYN EEEEECCCCCEEEEEECCCCEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEC GPPR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA