Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124022070

Identifier: 124022070

GI number: 124022070

Start: 364292

End: 364765

Strand: Reverse

Name: 124022070

Synonym: P9303_03601

Alternate gene names: NA

Gene position: 364765-364292 (Counterclockwise)

Preceding gene: 124022074

Following gene: 124022068

Centisome position: 13.6

GC content: 46.62

Gene sequence:

>474_bases
TTGGATCAATTGAAAGACAACAGCATCTTGACGCTAATTGACCAATTCCAGTTATCCCCACATCCGGAGGGAGGCTGGTA
CCGGGAAGTCATCCGAAGTGGTCTTACAGTAAAACGAAGTGATGGTCATCAACGCAATGCCATCACAGGGATCATTTTTC
TCTTAGGCAAGGATGATAAAAGTTGTTGGCATCGTGTCGATGGTGCAGATGAAATCTGGATTCACCTTCAGGGATCACCA
CTCTCTCTTTGGCGACTAGATCCAAATAGCAATGAAATAGTCAGATTAAAGCTGGATACAGCACAGCCAATGCAAATGAT
CCCCGCAGGATTTTGGCAAGCTGCTTGCAGCCAAGGTTCCTATACCTTGGTGAGCTGCTGTGTTAGCCCAGGTTTTGACT
TCGACGACTTCAAGATGCTTCGAGACATTCCCAAGGAATGCTGGCCAGAGGAAGCCCTCAGTGAACTGATTTAA

Upstream 100 bases:

>100_bases
CATTGAGACTAATCAAATCACTTACTCAAGCAAATAAAAAGGCCTACACCTCCTCCCGCCAAGAACACTCTGCCTACTCT
GAGGACATGCGAGCAATCTC

Downstream 100 bases:

>100_bases
TGCTGCCGTATTCACCTAAGCGCCGATGCCTGAAGGCTAAAAATTAAGCGGTAATTCCATTCATAGGCATCCCTCTAGCA
CCTCTAAGGTTTGCGTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MDQLKDNSILTLIDQFQLSPHPEGGWYREVIRSGLTVKRSDGHQRNAITGIIFLLGKDDKSCWHRVDGADEIWIHLQGSP
LSLWRLDPNSNEIVRLKLDTAQPMQMIPAGFWQAACSQGSYTLVSCCVSPGFDFDDFKMLRDIPKECWPEEALSELI

Sequences:

>Translated_157_residues
MDQLKDNSILTLIDQFQLSPHPEGGWYREVIRSGLTVKRSDGHQRNAITGIIFLLGKDDKSCWHRVDGADEIWIHLQGSP
LSLWRLDPNSNEIVRLKLDTAQPMQMIPAGFWQAACSQGSYTLVSCCVSPGFDFDDFKMLRDIPKECWPEEALSELI
>Mature_157_residues
MDQLKDNSILTLIDQFQLSPHPEGGWYREVIRSGLTVKRSDGHQRNAITGIIFLLGKDDKSCWHRVDGADEIWIHLQGSP
LSLWRLDPNSNEIVRLKLDTAQPMQMIPAGFWQAACSQGSYTLVSCCVSPGFDFDDFKMLRDIPKECWPEEALSELI

Specific function: Unknown

COG id: COG3542

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17848; Mature: 17848

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQLKDNSILTLIDQFQLSPHPEGGWYREVIRSGLTVKRSDGHQRNAITGIIFLLGKDDK
CCCCCCCCEEEEEEHHCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEEEEEECCCH
SCWHRVDGADEIWIHLQGSPLSLWRLDPNSNEIVRLKLDTAQPMQMIPAGFWQAACSQGS
HHHHHCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
YTLVSCCVSPGFDFDDFKMLRDIPKECWPEEALSELI
EEEEEEECCCCCCHHHHHHHHHCHHHCCHHHHHHHCC
>Mature Secondary Structure
MDQLKDNSILTLIDQFQLSPHPEGGWYREVIRSGLTVKRSDGHQRNAITGIIFLLGKDDK
CCCCCCCCEEEEEEHHCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEEEEEECCCH
SCWHRVDGADEIWIHLQGSPLSLWRLDPNSNEIVRLKLDTAQPMQMIPAGFWQAACSQGS
HHHHHCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
YTLVSCCVSPGFDFDDFKMLRDIPKECWPEEALSELI
EEEEEEECCCCCCHHHHHHHHHCHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA