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The map label for this gene is nusB [H]

Identifier: 124021724

GI number: 124021724

Start: 12142

End: 12777

Strand: Direct

Name: nusB [H]

Synonym: P9303_00091

Alternate gene names: 124021724

Gene position: 12142-12777 (Clockwise)

Preceding gene: 124021723

Following gene: 124021725

Centisome position: 0.45

GC content: 47.64

Gene sequence:

>636_bases
ATGCAGTCCAGATCACTTGCTCGAGAACTGGCTCTTTTGGTGCTTGGTCAGATTCCCGAACGTGAAAGTTCGAGGTTGAA
AACAATATCTTTGGAGAGTCTTCTTCAGAAGGCTTTTGATACCCTGAGTCAGCATTGGAGAGAGGGTCTTGATACTTGTG
CTGTTGAGCTTGAGAATGCTCAACAGCATTTACTCGATAGTGAGTTTCAAGATCGTGATGCGAGCTCTACGAGTCAGGTT
CGTGAGCATTTACAGGCTTGTCTTATTGGTGCAGAACAGGTTATTAATGGTGTTTCAACAAGTTTGGAAATCCCCCGTTT
GCTGGCGTTAGGAAACCAGGAGCAGATTCGGCTTGGGGCTCTAGAGCGTGTGAGGTTGGTGATAGAAAAACGCAACAGCA
TTGATGCAAGTATTGATGCTGTTATGGAGGGCTGGCGCTTGAGTCGTTTGCCTCGTATTGATCGGGATATCTTGAGGTTG
GCTGTGGTGGACTTGACTGCTCTTCAGACTCCATCTGCTGTGGCTTGCAATGAAGCTGTTGAATTGGCCCATCGCTACAG
CGATGATCAAGGTCGTCGCATGATTAATGGTGTCTTGAGACGCTTGCATGATGCCTCCACTGTGACGTTGGCCTAA

Upstream 100 bases:

>100_bases
GTTTCTCAAGTTTGATGACTCAATTGCGTTCTAATACTGCCCCGTCTTCTACGACTACGACCCAGGTTTGAGTTCGTCTC
CTCCCGTTCTTGTGTCGATC

Downstream 100 bases:

>100_bases
TGGTTTACGACTGGTTTAATCGTCAAGCCAGTGACGATGTTTCTACTGAGAAAGTTTTAGAGGAGAAGGCAGAAGGCTCT
GAGGAGCTCAGCTCCGATTC

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MQSRSLARELALLVLGQIPERESSRLKTISLESLLQKAFDTLSQHWREGLDTCAVELENAQQHLLDSEFQDRDASSTSQV
REHLQACLIGAEQVINGVSTSLEIPRLLALGNQEQIRLGALERVRLVIEKRNSIDASIDAVMEGWRLSRLPRIDRDILRL
AVVDLTALQTPSAVACNEAVELAHRYSDDQGRRMINGVLRRLHDASTVTLA

Sequences:

>Translated_211_residues
MQSRSLARELALLVLGQIPERESSRLKTISLESLLQKAFDTLSQHWREGLDTCAVELENAQQHLLDSEFQDRDASSTSQV
REHLQACLIGAEQVINGVSTSLEIPRLLALGNQEQIRLGALERVRLVIEKRNSIDASIDAVMEGWRLSRLPRIDRDILRL
AVVDLTALQTPSAVACNEAVELAHRYSDDQGRRMINGVLRRLHDASTVTLA
>Mature_211_residues
MQSRSLARELALLVLGQIPERESSRLKTISLESLLQKAFDTLSQHWREGLDTCAVELENAQQHLLDSEFQDRDASSTSQV
REHLQACLIGAEQVINGVSTSLEIPRLLALGNQEQIRLGALERVRLVIEKRNSIDASIDAVMEGWRLSRLPRIDRDILRL
AVVDLTALQTPSAVACNEAVELAHRYSDDQGRRMINGVLRRLHDASTVTLA

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 23595; Mature: 23595

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSRSLARELALLVLGQIPERESSRLKTISLESLLQKAFDTLSQHWREGLDTCAVELENA
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQHLLDSEFQDRDASSTSQVREHLQACLIGAEQVINGVSTSLEIPRLLALGNQEQIRLGA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LERVRLVIEKRNSIDASIDAVMEGWRLSRLPRIDRDILRLAVVDLTALQTPSAVACNEAV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ELAHRYSDDQGRRMINGVLRRLHDASTVTLA
HHHHHCCCHHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MQSRSLARELALLVLGQIPERESSRLKTISLESLLQKAFDTLSQHWREGLDTCAVELENA
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQHLLDSEFQDRDASSTSQVREHLQACLIGAEQVINGVSTSLEIPRLLALGNQEQIRLGA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LERVRLVIEKRNSIDASIDAVMEGWRLSRLPRIDRDILRLAVVDLTALQTPSAVACNEAV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ELAHRYSDDQGRRMINGVLRRLHDASTVTLA
HHHHHCCCHHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA