Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124021722
Identifier: 124021722
GI number: 124021722
Start: 10602
End: 11291
Strand: Direct
Name: 124021722
Synonym: P9303_00071
Alternate gene names: NA
Gene position: 10602-11291 (Clockwise)
Preceding gene: 124021718
Following gene: 124021723
Centisome position: 0.4
GC content: 50.29
Gene sequence:
>690_bases TTGATTACCTTTTGGCATCGTGCCTTGCCTGCTTCTGAGTTGGGATCAAGTTCAGCCGGTCGTTTAACTCCGTTGATGCG CTGGCTTGGACTCACCCTCGTGATTTTGCTGCTGTTGCAGATGGTTGTCTTGCTTGGTGCAAGCGATTGGGCTTCGGCGG AGTTTCAGCAAGTGATGGTTCAGCGTTTGGTTACGCTTTCTCCGATGGGATTTATAGGTCTGTTGCTGATGTTGATCAGT TCCAGGCTGGATCATCCAGGTAAAGCAAAACTGCCGATTCGCTGGCTGATTTGTGCTTTTTCTAGTCTTTTTGCTATTGC CATGATCGCAGTGATTCCAATGGCGATCTCCGGTAATCAGACCCTCGCTGGACAGGCAAATCAAACTTTGAAGCAAAGGC GAGATCAGCTTGAGGAAGCCCGTAGACAGGCTCAGAACCCTGAAGCTCTCAAGGTCCTTGGTGCTCAGCTTGCACAAGCT GGTCAGTTGCCTGCTACTGCAACAGATGAAGATCAGCAAAAGGCAGCCAATGATTTCGTCGCTGGTCAATTGACTCAGAT GGATCAGCAGATCCAGCAAATGGAGCGGCAGCGCAATCTTGCAGTGAATCAGCGTCGTTTTGGTGGCACCCTTAGTGCTG TTGTGCTTGCAGTGGCTTTTGTGTTGCTTGCGCTCACAGCCGTGCTTTAA
Upstream 100 bases:
>100_bases ATTCCTACAGGATCAAAACCTTGTTTTTTTGCTTGCTCTTTGAGCTCATGGCTGAGTTGATCTTGGTTGGCGCAGATTTT CACAACCATCAACCGTACAC
Downstream 100 bases:
>100_bases AACTCGGCAGAAGTCAGACAGCTGGTTAGGTTGGTTCAATCAAGTCCGCTTTTGGCCTCAGACTTTCCTTGGTGCAGTCC AATCCCAGAACAGATCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MITFWHRALPASELGSSSAGRLTPLMRWLGLTLVILLLLQMVVLLGASDWASAEFQQVMVQRLVTLSPMGFIGLLLMLIS SRLDHPGKAKLPIRWLICAFSSLFAIAMIAVIPMAISGNQTLAGQANQTLKQRRDQLEEARRQAQNPEALKVLGAQLAQA GQLPATATDEDQQKAANDFVAGQLTQMDQQIQQMERQRNLAVNQRRFGGTLSAVVLAVAFVLLALTAVL
Sequences:
>Translated_229_residues MITFWHRALPASELGSSSAGRLTPLMRWLGLTLVILLLLQMVVLLGASDWASAEFQQVMVQRLVTLSPMGFIGLLLMLIS SRLDHPGKAKLPIRWLICAFSSLFAIAMIAVIPMAISGNQTLAGQANQTLKQRRDQLEEARRQAQNPEALKVLGAQLAQA GQLPATATDEDQQKAANDFVAGQLTQMDQQIQQMERQRNLAVNQRRFGGTLSAVVLAVAFVLLALTAVL >Mature_229_residues MITFWHRALPASELGSSSAGRLTPLMRWLGLTLVILLLLQMVVLLGASDWASAEFQQVMVQRLVTLSPMGFIGLLLMLIS SRLDHPGKAKLPIRWLICAFSSLFAIAMIAVIPMAISGNQTLAGQANQTLKQRRDQLEEARRQAQNPEALKVLGAQLAQA GQLPATATDEDQQKAANDFVAGQLTQMDQQIQQMERQRNLAVNQRRFGGTLSAVVLAVAFVLLALTAVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24982; Mature: 24982
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITFWHRALPASELGSSSAGRLTPLMRWLGLTLVILLLLQMVVLLGASDWASAEFQQVMV CCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QRLVTLSPMGFIGLLLMLISSRLDHPGKAKLPIRWLICAFSSLFAIAMIAVIPMAISGNQ HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TLAGQANQTLKQRRDQLEEARRQAQNPEALKVLGAQLAQAGQLPATATDEDQQKAANDFV CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AGQLTQMDQQIQQMERQRNLAVNQRRFGGTLSAVVLAVAFVLLALTAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MITFWHRALPASELGSSSAGRLTPLMRWLGLTLVILLLLQMVVLLGASDWASAEFQQVMV CCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QRLVTLSPMGFIGLLLMLISSRLDHPGKAKLPIRWLICAFSSLFAIAMIAVIPMAISGNQ HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TLAGQANQTLKQRRDQLEEARRQAQNPEALKVLGAQLAQAGQLPATATDEDQQKAANDFV CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AGQLTQMDQQIQQMERQRNLAVNQRRFGGTLSAVVLAVAFVLLALTAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA