| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 124021677
Identifier: 124021677
GI number: 124021677
Start: 955988
End: 956389
Strand: Direct
Name: 124021677
Synonym: Ping_0760
Alternate gene names: NA
Gene position: 955988-956389 (Clockwise)
Preceding gene: 124021676
Following gene: 124021678
Centisome position: 20.97
GC content: 35.82
Gene sequence:
>402_bases ATGCCAAATCAAGCTGATCTACTCGCAGCAATTCAAAGGCTCGCAGCAAATAATCAGGATATTTCTGTCGTCTGGTTATA CGGCTCACGAGCAGCAGATAATTTTAAATCACACAGTGATTTTGATATTGCTATCGCATTTAAAAATTTTAAGTTATCAG TGATAGACAAATATTTAAGGCCAAATGAACTGGCAATTGACTGGGCTATTGAACTTGGATTGCCGTCAGAGATGTTAAGT ATTGTTGATATAAACCAAGCGCCCATATACTTAGCTTATAACATAATAGAAGACGGGCAAGTCATATACGAAACACAAAC ATCTCGGGTTTATAGAGAAAGAAACAGAATATACAGCCAATACGAGCATCAAATAATAGAGAATGCCAAAAATGAAAAAT GA
Upstream 100 bases:
>100_bases GTATAGTGAAAGGAAATAAAAAATAAGTATAGGAAGCTGGGGTGAGGGGAATGTAAAATGAAAGGCCTAACTCCCTAGTG TTTTTTTCATTGGATTATGT
Downstream 100 bases:
>100_bases AGGCCTGCAGCTTTACTTAGCAGAAGTACTGAAGCACAAAAAAAAATACTTAACAGAGCTAGATGAATTAAGAGAGGATC TTTTAGCTGATAACTTTAAA
Product: DNA polymerase beta subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MPNQADLLAAIQRLAANNQDISVVWLYGSRAADNFKSHSDFDIAIAFKNFKLSVIDKYLRPNELAIDWAIELGLPSEMLS IVDINQAPIYLAYNIIEDGQVIYETQTSRVYRERNRIYSQYEHQIIENAKNEK
Sequences:
>Translated_133_residues MPNQADLLAAIQRLAANNQDISVVWLYGSRAADNFKSHSDFDIAIAFKNFKLSVIDKYLRPNELAIDWAIELGLPSEMLS IVDINQAPIYLAYNIIEDGQVIYETQTSRVYRERNRIYSQYEHQIIENAKNEK >Mature_132_residues PNQADLLAAIQRLAANNQDISVVWLYGSRAADNFKSHSDFDIAIAFKNFKLSVIDKYLRPNELAIDWAIELGLPSEMLSI VDINQAPIYLAYNIIEDGQVIYETQTSRVYRERNRIYSQYEHQIIENAKNEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15352; Mature: 15221
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNQADLLAAIQRLAANNQDISVVWLYGSRAADNFKSHSDFDIAIAFKNFKLSVIDKYLR CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEHHHHCC PNELAIDWAIELGLPSEMLSIVDINQAPIYLAYNIIEDGQVIYETQTSRVYRERNRIYSQ CCCEEEEEEEECCCCHHHHHEEECCCCCEEEEEEEECCCEEEEECHHHHHHHHHHHHHHH YEHQIIENAKNEK HHHHHHHHCCCCC >Mature Secondary Structure PNQADLLAAIQRLAANNQDISVVWLYGSRAADNFKSHSDFDIAIAFKNFKLSVIDKYLR CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEHHHHCC PNELAIDWAIELGLPSEMLSIVDINQAPIYLAYNIIEDGQVIYETQTSRVYRERNRIYSQ CCCEEEEEEEECCCCHHHHHEEECCCCCEEEEEEEECCCEEEEECHHHHHHHHHHHHHHH YEHQIIENAKNEK HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA