Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968880
Identifier: 123968880
GI number: 123968880
Start: 1122055
End: 1122657
Strand: Reverse
Name: 123968880
Synonym: A9601_13471
Alternate gene names: NA
Gene position: 1122657-1122055 (Counterclockwise)
Preceding gene: 123968881
Following gene: 123968872
Centisome position: 67.23
GC content: 25.37
Gene sequence:
>603_bases ATGCCTTTTAATAATTCAATATCAAAATATGATTGGCAGTTTATTGTAACTGGATTTTTGTTAATCTCAGTTTTTATTTT TACAGATTTAATTGGAGTTATTGATAAGGAATATTTTTACTTTGTACCAAGATTAATTAGTGTTCAACCCTATAGGATTT TCACATCAACTCTAACTCATGCAGATTTAAATCATTTATTAACTAATCTTAGTGGAATTATCATCACTAGATATTTTTTG ATGAGACTCAGAATTAAAAGTAGATTTTTTTATTTGAAATTTATTTTAATTTGTTCTTTTTTAAATTTTTTTATTATCTG GTTTTACGAGATGACTCTATCGTACTTTAATATCTTTCCGAATTATGCCTCAATAGGATTTAGTGGAATAATTTATGCTT TTTTGGGATTCTTATTGTTAACTTCTATTTATGGAAAGAAATATTTTTTAGGTAAAGAAATTGGTTTTAAGTCTAATTAT GAAGTTCAAAAAATGTTAAAAACAATATGCCTGATAGGTCTGATTTTCTCTTTTTTGCCGGGGGTAAGTTTACTTGGGCA CTTAAGTGGATTTATTTCAGGATGTTGTTTATTTTTAATCTAA
Upstream 100 bases:
>100_bases AAAGTTTACTAAAGGCAATATAAATTAAGATATTAATTAAGATCCTTGTCAGGGTTTTTTCTTATATTTAAGAAGATATT TTTAAATTTAAAACTTAAAA
Downstream 100 bases:
>100_bases TTTAGAATAATTATGAGCACTATTTTTTTATATAAATACTGTTAAAAATACTAAACCAGAATGGATATTTAGATCTCATA CCAAGAAGGTTTAAAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPFNNSISKYDWQFIVTGFLLISVFIFTDLIGVIDKEYFYFVPRLISVQPYRIFTSTLTHADLNHLLTNLSGIIITRYFL MRLRIKSRFFYLKFILICSFLNFFIIWFYEMTLSYFNIFPNYASIGFSGIIYAFLGFLLLTSIYGKKYFLGKEIGFKSNY EVQKMLKTICLIGLIFSFLPGVSLLGHLSGFISGCCLFLI
Sequences:
>Translated_200_residues MPFNNSISKYDWQFIVTGFLLISVFIFTDLIGVIDKEYFYFVPRLISVQPYRIFTSTLTHADLNHLLTNLSGIIITRYFL MRLRIKSRFFYLKFILICSFLNFFIIWFYEMTLSYFNIFPNYASIGFSGIIYAFLGFLLLTSIYGKKYFLGKEIGFKSNY EVQKMLKTICLIGLIFSFLPGVSLLGHLSGFISGCCLFLI >Mature_199_residues PFNNSISKYDWQFIVTGFLLISVFIFTDLIGVIDKEYFYFVPRLISVQPYRIFTSTLTHADLNHLLTNLSGIIITRYFLM RLRIKSRFFYLKFILICSFLNFFIIWFYEMTLSYFNIFPNYASIGFSGIIYAFLGFLLLTSIYGKKYFLGKEIGFKSNYE VQKMLKTICLIGLIFSFLPGVSLLGHLSGFISGCCLFLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23347; Mature: 23216
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNNSISKYDWQFIVTGFLLISVFIFTDLIGVIDKEYFYFVPRLISVQPYRIFTSTLTH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ADLNHLLTNLSGIIITRYFLMRLRIKSRFFYLKFILICSFLNFFIIWFYEMTLSYFNIFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NYASIGFSGIIYAFLGFLLLTSIYGKKYFLGKEIGFKSNYEVQKMLKTICLIGLIFSFLP CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GVSLLGHLSGFISGCCLFLI HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PFNNSISKYDWQFIVTGFLLISVFIFTDLIGVIDKEYFYFVPRLISVQPYRIFTSTLTH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ADLNHLLTNLSGIIITRYFLMRLRIKSRFFYLKFILICSFLNFFIIWFYEMTLSYFNIFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NYASIGFSGIIYAFLGFLLLTSIYGKKYFLGKEIGFKSNYEVQKMLKTICLIGLIFSFLP CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GVSLLGHLSGFISGCCLFLI HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA