Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968860
Identifier: 123968860
GI number: 123968860
Start: 1104287
End: 1104499
Strand: Reverse
Name: 123968860
Synonym: A9601_13271
Alternate gene names: NA
Gene position: 1104499-1104287 (Counterclockwise)
Preceding gene: 123968861
Following gene: 123968859
Centisome position: 66.14
GC content: 25.82
Gene sequence:
>213_bases ATGTCTGTTTCTAAGTCTAAAAATCTTGAACGAAAACTAGATAATTTTGCAAAAGAAGCAAAAAATGAATTGAATAATGT TTGCGGATCTTCATTATGGGAAAGCCTTGGCTTTGTTTTTTTTGATCAATTAGAAGATTCTGAAAAAATTGCAAAAGCTA ATTTTTACTATGGTCAACTTCAAATAATTAATGAAATTAAATTTTCAATTTGA
Upstream 100 bases:
>100_bases GGAAGCAGATCTAAATATTGAAGAAAAAAAGAGATTACCTTTTTAATATTGCAATTTTAGACTTATATAGTATATTTGTA CTAAATAAAATTACTGATCT
Downstream 100 bases:
>100_bases ATTGAATTCTATATTGTTACGTATGTAATTTTTCTTAAATCAATTTTGGCCAATCTTTTTCTGATAATATGAATGTAGTA AAAGATTAATTAATGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MSVSKSKNLERKLDNFAKEAKNELNNVCGSSLWESLGFVFFDQLEDSEKIAKANFYYGQLQIINEIKFSI
Sequences:
>Translated_70_residues MSVSKSKNLERKLDNFAKEAKNELNNVCGSSLWESLGFVFFDQLEDSEKIAKANFYYGQLQIINEIKFSI >Mature_69_residues SVSKSKNLERKLDNFAKEAKNELNNVCGSSLWESLGFVFFDQLEDSEKIAKANFYYGQLQIINEIKFSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8069; Mature: 7938
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSKSKNLERKLDNFAKEAKNELNNVCGSSLWESLGFVFFDQLEDSEKIAKANFYYGQL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QIINEIKFSI HHHHHHHHCC >Mature Secondary Structure SVSKSKNLERKLDNFAKEAKNELNNVCGSSLWESLGFVFFDQLEDSEKIAKANFYYGQL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QIINEIKFSI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA