Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968841
Identifier: 123968841
GI number: 123968841
Start: 1087729
End: 1087944
Strand: Reverse
Name: 123968841
Synonym: A9601_13081
Alternate gene names: NA
Gene position: 1087944-1087729 (Counterclockwise)
Preceding gene: 123968842
Following gene: 123968836
Centisome position: 65.15
GC content: 25.0
Gene sequence:
>216_bases ATGCCAAAAATATTCAAACAAAATAAGTTTGCTTTGTTGGGAGCAAATATATTAATAATTTTACTTTGGGTAACTATATC TTCCTTTTTGATGAATTTATTTAAAAGTGAAAATGCTCCATTTTATATATATAAAATTTCTTTTTTAATCAGATTCATTC CTCCTATTTGGGTTACATGGTTCCTTTGGATAAAAAGAGGTGGTTTAAAAAGATAA
Upstream 100 bases:
>100_bases TTTTTTATTTGGATATGGATTTTAAATTTGAAGTTTTTTTGAAAATGTATAATTTATTTCCCGAGATTATTTAAAATTAA GAATATAAAAAATTTACCTT
Downstream 100 bases:
>100_bases ATTACAAAAGCATTTTTACGGATTTACTATAAAAACAAATCAGTTAAGATCTGAAAGCTTACTTGAAATTTTCATGTAAG AATTAGGTAATTGAGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MPKIFKQNKFALLGANILIILLWVTISSFLMNLFKSENAPFYIYKISFLIRFIPPIWVTWFLWIKRGGLKR
Sequences:
>Translated_71_residues MPKIFKQNKFALLGANILIILLWVTISSFLMNLFKSENAPFYIYKISFLIRFIPPIWVTWFLWIKRGGLKR >Mature_70_residues PKIFKQNKFALLGANILIILLWVTISSFLMNLFKSENAPFYIYKISFLIRFIPPIWVTWFLWIKRGGLKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8507; Mature: 8375
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKIFKQNKFALLGANILIILLWVTISSFLMNLFKSENAPFYIYKISFLIRFIPPIWVTW CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH FLWIKRGGLKR HHHHHCCCCCC >Mature Secondary Structure PKIFKQNKFALLGANILIILLWVTISSFLMNLFKSENAPFYIYKISFLIRFIPPIWVTW CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH FLWIKRGGLKR HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA