Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968825

Identifier: 123968825

GI number: 123968825

Start: 1079086

End: 1079460

Strand: Reverse

Name: 123968825

Synonym: A9601_12921

Alternate gene names: NA

Gene position: 1079460-1079086 (Counterclockwise)

Preceding gene: 123968826

Following gene: 123968824

Centisome position: 64.64

GC content: 25.87

Gene sequence:

>375_bases
TTGGTCAGCAAAAAAAAAATGGAAGATTCTGGTGAATTGATATTGGGAAATATTATTAAGCTAACCCGATCAAGTGAAAA
GAAATTTAAACTTGGAAATTTTAAAGGAGCTTTAGAAGACAAAATTAAAGCTAATGAGATATTGAAATATAAATCTTGTG
ATGAAAAAATTATTGAAAAGTATAGAGAAGAATTATCTAATTTGTACTCTTCAAAATTCGATCTTATATTTGATCATAAG
CTTAAAATTGATGCAATTAAGAGAAATGAAATAGTACAAATGTTGGAACGTAAAAGTGAGGAAAAATTAAAAAATCATGA
TTACAGAGGAGCAATAAAAGCATTAAGAAGGGCAGAAAAATACTTATCAAATTAA

Upstream 100 bases:

>100_bases
TCGATTTACTTCTTGAAAGAGGACTTGTTATTGGCTAATTAATTAATTATTTGATTATTAAAAATGAATACTTTTTTTCT
TTAGGCTGATAGGATTAATT

Downstream 100 bases:

>100_bases
AAAAAACTACAAAAAATTTTAAGAAGTATTGCTTATTGTGTTTTTTTTAGCTTAATTTAAATTTGAAATAATTAGGCAAT
AATTTATGCAAAAACAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MVSKKKMEDSGELILGNIIKLTRSSEKKFKLGNFKGALEDKIKANEILKYKSCDEKIIEKYREELSNLYSSKFDLIFDHK
LKIDAIKRNEIVQMLERKSEEKLKNHDYRGAIKALRRAEKYLSN

Sequences:

>Translated_124_residues
MVSKKKMEDSGELILGNIIKLTRSSEKKFKLGNFKGALEDKIKANEILKYKSCDEKIIEKYREELSNLYSSKFDLIFDHK
LKIDAIKRNEIVQMLERKSEEKLKNHDYRGAIKALRRAEKYLSN
>Mature_124_residues
MVSKKKMEDSGELILGNIIKLTRSSEKKFKLGNFKGALEDKIKANEILKYKSCDEKIIEKYREELSNLYSSKFDLIFDHK
LKIDAIKRNEIVQMLERKSEEKLKNHDYRGAIKALRRAEKYLSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14599; Mature: 14599

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSKKKMEDSGELILGNIIKLTRSSEKKFKLGNFKGALEDKIKANEILKYKSCDEKIIEK
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
YREELSNLYSSKFDLIFDHKLKIDAIKRNEIVQMLERKSEEKLKNHDYRGAIKALRRAEK
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YLSN
HHCC
>Mature Secondary Structure
MVSKKKMEDSGELILGNIIKLTRSSEKKFKLGNFKGALEDKIKANEILKYKSCDEKIIEK
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
YREELSNLYSSKFDLIFDHKLKIDAIKRNEIVQMLERKSEEKLKNHDYRGAIKALRRAEK
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YLSN
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA