Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968800

Identifier: 123968800

GI number: 123968800

Start: 1070214

End: 1070525

Strand: Reverse

Name: 123968800

Synonym: A9601_12671

Alternate gene names: NA

Gene position: 1070525-1070214 (Counterclockwise)

Preceding gene: 123968804

Following gene: 123968799

Centisome position: 64.11

GC content: 40.06

Gene sequence:

>312_bases
ATGCAAACTTACATCGTACACTGGCAATTTCCAGATCAAGAAAGTCATATGCAAGGGGCTGAAGCTTTTGCGGGTTTTGT
TGAAGGAGGGTGCGAAGGTGATGAATTTGATGGGTTTAAAGTTCTTAATCGAGTAGTAAATCCTGAGGGGGCTAATGGTT
GGGCAATAGTTGAATCTTCAAACCATCAGAACATTTGGAAATGGAGCAGTATCTGGGTCGATAATTTTGGCGTAGAAATT
GAAGTTACACCAGTTCTAACGGATAAAGAATTTCTTTCCGTCCATAAAGAAATTGCAGCAGCTTCTAACTAA

Upstream 100 bases:

>100_bases
GTTTTCCCTTTTAAGCTTAAACCCTTTTTGATTAGTGTTTAAAGACTTTTTATTTAATTTTTAAATTCGATAATTAATAA
TTAAAAAAATAATTTTATTC

Downstream 100 bases:

>100_bases
TAGTTAATTTTTTTGATGTTTGACATTTGATCTAAAAATAAAATGATATTTGCTATTTTTTATGGGAAAGTTTTCTTCTG
AAGAAATTGAAAGTCAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MQTYIVHWQFPDQESHMQGAEAFAGFVEGGCEGDEFDGFKVLNRVVNPEGANGWAIVESSNHQNIWKWSSIWVDNFGVEI
EVTPVLTDKEFLSVHKEIAAASN

Sequences:

>Translated_103_residues
MQTYIVHWQFPDQESHMQGAEAFAGFVEGGCEGDEFDGFKVLNRVVNPEGANGWAIVESSNHQNIWKWSSIWVDNFGVEI
EVTPVLTDKEFLSVHKEIAAASN
>Mature_103_residues
MQTYIVHWQFPDQESHMQGAEAFAGFVEGGCEGDEFDGFKVLNRVVNPEGANGWAIVESSNHQNIWKWSSIWVDNFGVEI
EVTPVLTDKEFLSVHKEIAAASN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11556; Mature: 11556

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTYIVHWQFPDQESHMQGAEAFAGFVEGGCEGDEFDGFKVLNRVVNPEGANGWAIVESS
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECC
NHQNIWKWSSIWVDNFGVEIEVTPVLTDKEFLSVHKEIAAASN
CCCCEEEEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTYIVHWQFPDQESHMQGAEAFAGFVEGGCEGDEFDGFKVLNRVVNPEGANGWAIVESS
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECC
NHQNIWKWSSIWVDNFGVEIEVTPVLTDKEFLSVHKEIAAASN
CCCCEEEEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA