Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968759
Identifier: 123968759
GI number: 123968759
Start: 1043975
End: 1045819
Strand: Reverse
Name: 123968759
Synonym: A9601_12261
Alternate gene names: NA
Gene position: 1045819-1043975 (Counterclockwise)
Preceding gene: 123968760
Following gene: 123968758
Centisome position: 62.63
GC content: 24.93
Gene sequence:
>1845_bases TTGAAAAAAATTGACTTATTAAAAAAAATTGAAGAAGCAAAAATAAAACATAAAGCAGGGAACTCTTTAGAGGCAAATCA GATATTTCAAGAGTTATTAAAATCAAATAATGATTCTTTTGATTTACTTTACGCTTATGGGTTGTTTTGTAGAGATTTAA AAAATTTTAATTTAGCAAAAAGAGTATTTCTCAATCTAATTAATAAATTCTCATCATCAATTAATTCTTATATTTTATTA GCTGAAATATTAAAAATTGAGAACAAATTCAATGATGCAGAAAGGGTACTGCAAAAGGCAATAAAAATTAATCCTAATCA TGGAGATTTACTTTATAATCTTTCTCTTTTGTACTTTACATTGAGAAACTTTGATTATGCACTAGATTATATAGATAAAG CTATTAAAGTATCGATAAATAATGATATTTATAAACTTTTAAAGTCTGAGATTTATATCAATAAATTCAATATTGATGAA GCATTGTATATCTTGGAAAATCTAAATAATAAAAATAGAATTAAAAAAGATAAAAATAAAGAAATAAGAATAAATATTCT TCTAGCCAATGCATTCCTAAAAAAAAGGAAGTACGAAGAAGCAGAAACAATTCTTTTAAAATTGACCAAAAAATATCAAG GATTGGAATTGGCTTATTTAAATTTAAGTATTCTGTATAAGGATAAGAATCAATTAAGTAAAAGTATACAAATACTAAAA AAGGGAATAAACCTATCTCCCAATTTCATGCCTTTTTATAAAAATTTAGCAAGTTTCTATAGAAATTCAGGACAGCTTAA ACTTGCTATTGAGACTAACTTATTTATTATTTCTAGAAATAAATTTGACTTCAATAGTTTTTATGAATTATCTGGGATTT ATGATTTTAAGAATCATAAAAATGAATTAGATTTTTTATTAAATACTAAACTTGAGAATCTTAATCCAAACTCAAAGATA TACGCAGCTTTTGCAATCTCAAATTTGCTGCACAAACAAGGAAAATTTAAAGAAAGTGCAAAATATCTAAAAATCGCCAA TGACGAAGGCATGAAGTATAAAAAATCTGACTCAAGTTTGAAGATTAAACATACTGAATCTTATAGATCACTAAAAATCA AAAAATCAAAAAATAAATATTTGAAGAATTCTTCTAATTATGTCTTTATTGTTGGCATGCCAAGATCAGGAAGTACTTTA CTGGAAAACATATTAAGTTTAAATTCTGAAGTAACTGATATGGGCGAGGTTAGCTTTTTAGAGGAATCCATCAAGGAAGC TAAAGATTTTGAAGAAATATATGATTTATATGAAAAAAAAGTTATTAATCAATTTAAATCCGCTACCTTTTACACCGATA AAAGTTTATTTAATTATATGTATATTGCCATTATTTCTAATTTTTTTCCTAAAGCAAAAATAATAAATTGCATAAGAAAC CCTCTCGATAATATTTTATCCATTTATAGAGCAAACTTTTTAAATCAGTCATTCTCTTTCTCTTTATCTGATATTTCTTG TTTATATAAACACTATTTTGAAACTATGGAGGAATATAAAATTAAATATGGTGTAAATATTTATGATTATTACTATGAAG ACTTAATTGAAAATCCCAATAATGTAATACCTAGGATAATAAATTGGCTTGGTTGGGATTGGGACGAAAAATATCTTTCT CCCCATCAAAACAAAAGAAATGTACACACCGCAAGTAGCGCTCAAATAAGAAAGAAATTTTATTCTTCTTCTATAGGAAT TTGGAAAGAATATAAGGAACTTTTGGAACCTGCAATAGAAATTATTAAAACAAATAAACTTCTTGCAGAAAAGATTTCTA GGTGA
Upstream 100 bases:
>100_bases AAAGATCTGCTATAAAGCAGATCTTTTTTTTTTAATTTCTAAAATTAATATTTTTTTTTAATACTTTCATTAACTATAAT GTATAAAAAATTTAAATATA
Downstream 100 bases:
>100_bases AGAGAGTGTTTTAGTAATAACCGGCTCGGATTTTGTCTACTGGAGGTTGTAAATTCTTGGCAAATAGATTACCTTTAAAA TACCTTAAATTGTGTGAGGA
Product: TPR repeat-containing sulfotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MKKIDLLKKIEEAKIKHKAGNSLEANQIFQELLKSNNDSFDLLYAYGLFCRDLKNFNLAKRVFLNLINKFSSSINSYILL AEILKIENKFNDAERVLQKAIKINPNHGDLLYNLSLLYFTLRNFDYALDYIDKAIKVSINNDIYKLLKSEIYINKFNIDE ALYILENLNNKNRIKKDKNKEIRINILLANAFLKKRKYEEAETILLKLTKKYQGLELAYLNLSILYKDKNQLSKSIQILK KGINLSPNFMPFYKNLASFYRNSGQLKLAIETNLFIISRNKFDFNSFYELSGIYDFKNHKNELDFLLNTKLENLNPNSKI YAAFAISNLLHKQGKFKESAKYLKIANDEGMKYKKSDSSLKIKHTESYRSLKIKKSKNKYLKNSSNYVFIVGMPRSGSTL LENILSLNSEVTDMGEVSFLEESIKEAKDFEEIYDLYEKKVINQFKSATFYTDKSLFNYMYIAIISNFFPKAKIINCIRN PLDNILSIYRANFLNQSFSFSLSDISCLYKHYFETMEEYKIKYGVNIYDYYYEDLIENPNNVIPRIINWLGWDWDEKYLS PHQNKRNVHTASSAQIRKKFYSSSIGIWKEYKELLEPAIEIIKTNKLLAEKISR
Sequences:
>Translated_614_residues MKKIDLLKKIEEAKIKHKAGNSLEANQIFQELLKSNNDSFDLLYAYGLFCRDLKNFNLAKRVFLNLINKFSSSINSYILL AEILKIENKFNDAERVLQKAIKINPNHGDLLYNLSLLYFTLRNFDYALDYIDKAIKVSINNDIYKLLKSEIYINKFNIDE ALYILENLNNKNRIKKDKNKEIRINILLANAFLKKRKYEEAETILLKLTKKYQGLELAYLNLSILYKDKNQLSKSIQILK KGINLSPNFMPFYKNLASFYRNSGQLKLAIETNLFIISRNKFDFNSFYELSGIYDFKNHKNELDFLLNTKLENLNPNSKI YAAFAISNLLHKQGKFKESAKYLKIANDEGMKYKKSDSSLKIKHTESYRSLKIKKSKNKYLKNSSNYVFIVGMPRSGSTL LENILSLNSEVTDMGEVSFLEESIKEAKDFEEIYDLYEKKVINQFKSATFYTDKSLFNYMYIAIISNFFPKAKIINCIRN PLDNILSIYRANFLNQSFSFSLSDISCLYKHYFETMEEYKIKYGVNIYDYYYEDLIENPNNVIPRIINWLGWDWDEKYLS PHQNKRNVHTASSAQIRKKFYSSSIGIWKEYKELLEPAIEIIKTNKLLAEKISR >Mature_614_residues MKKIDLLKKIEEAKIKHKAGNSLEANQIFQELLKSNNDSFDLLYAYGLFCRDLKNFNLAKRVFLNLINKFSSSINSYILL AEILKIENKFNDAERVLQKAIKINPNHGDLLYNLSLLYFTLRNFDYALDYIDKAIKVSINNDIYKLLKSEIYINKFNIDE ALYILENLNNKNRIKKDKNKEIRINILLANAFLKKRKYEEAETILLKLTKKYQGLELAYLNLSILYKDKNQLSKSIQILK KGINLSPNFMPFYKNLASFYRNSGQLKLAIETNLFIISRNKFDFNSFYELSGIYDFKNHKNELDFLLNTKLENLNPNSKI YAAFAISNLLHKQGKFKESAKYLKIANDEGMKYKKSDSSLKIKHTESYRSLKIKKSKNKYLKNSSNYVFIVGMPRSGSTL LENILSLNSEVTDMGEVSFLEESIKEAKDFEEIYDLYEKKVINQFKSATFYTDKSLFNYMYIAIISNFFPKAKIINCIRN PLDNILSIYRANFLNQSFSFSLSDISCLYKHYFETMEEYKIKYGVNIYDYYYEDLIENPNNVIPRIINWLGWDWDEKYLS PHQNKRNVHTASSAQIRKKFYSSSIGIWKEYKELLEPAIEIIKTNKLLAEKISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 72212; Mature: 72212
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIDLLKKIEEAKIKHKAGNSLEANQIFQELLKSNNDSFDLLYAYGLFCRDLKNFNLAK CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCHHH RVFLNLINKFSSSINSYILLAEILKIENKFNDAERVLQKAIKINPNHGDLLYNLSLLYFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LRNFDYALDYIDKAIKVSINNDIYKLLKSEIYINKFNIDEALYILENLNNKNRIKKDKNK HHHHHHHHHHHCHHEEEEECHHHHHHHHHHHEEEEECHHHHHHHHHCCCCCCCCCCCCCC EIRINILLANAFLKKRKYEEAETILLKLTKKYQGLELAYLNLSILYKDKNQLSKSIQILK EEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHH KGINLSPNFMPFYKNLASFYRNSGQLKLAIETNLFIISRNKFDFNSFYELSGIYDFKNHK HCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCHHHHCCEEHHHCCC NELDFLLNTKLENLNPNSKIYAAFAISNLLHKQGKFKESAKYLKIANDEGMKYKKSDSSL CHHHHHHHCHHCCCCCCCCEEHHHHHHHHHHHCCCHHHCCCEEEEECCCCCEEECCCCCE KIKHTESYRSLKIKKSKNKYLKNSSNYVFIVGMPRSGSTLLENILSLNSEVTDMGEVSFL EEEECCCHHHEEEECHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHH EESIKEAKDFEEIYDLYEKKVINQFKSATFYTDKSLFNYMYIAIISNFFPKAKIINCIRN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH PLDNILSIYRANFLNQSFSFSLSDISCLYKHYFETMEEYKIKYGVNIYDYYYEDLIENPN HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC NVIPRIINWLGWDWDEKYLSPHQNKRNVHTASSAQIRKKFYSSSIGIWKEYKELLEPAIE HHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IIKTNKLLAEKISR HHHHHHHHHHHHCC >Mature Secondary Structure MKKIDLLKKIEEAKIKHKAGNSLEANQIFQELLKSNNDSFDLLYAYGLFCRDLKNFNLAK CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCHHH RVFLNLINKFSSSINSYILLAEILKIENKFNDAERVLQKAIKINPNHGDLLYNLSLLYFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LRNFDYALDYIDKAIKVSINNDIYKLLKSEIYINKFNIDEALYILENLNNKNRIKKDKNK HHHHHHHHHHHCHHEEEEECHHHHHHHHHHHEEEEECHHHHHHHHHCCCCCCCCCCCCCC EIRINILLANAFLKKRKYEEAETILLKLTKKYQGLELAYLNLSILYKDKNQLSKSIQILK EEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHH KGINLSPNFMPFYKNLASFYRNSGQLKLAIETNLFIISRNKFDFNSFYELSGIYDFKNHK HCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCHHHHCCEEHHHCCC NELDFLLNTKLENLNPNSKIYAAFAISNLLHKQGKFKESAKYLKIANDEGMKYKKSDSSL CHHHHHHHCHHCCCCCCCCEEHHHHHHHHHHHCCCHHHCCCEEEEECCCCCEEECCCCCE KIKHTESYRSLKIKKSKNKYLKNSSNYVFIVGMPRSGSTLLENILSLNSEVTDMGEVSFL EEEECCCHHHEEEECHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHH EESIKEAKDFEEIYDLYEKKVINQFKSATFYTDKSLFNYMYIAIISNFFPKAKIINCIRN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH PLDNILSIYRANFLNQSFSFSLSDISCLYKHYFETMEEYKIKYGVNIYDYYYEDLIENPN HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC NVIPRIINWLGWDWDEKYLSPHQNKRNVHTASSAQIRKKFYSSSIGIWKEYKELLEPAIE HHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IIKTNKLLAEKISR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]