Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is prsA [H]
Identifier: 123968719
GI number: 123968719
Start: 1000177
End: 1001172
Strand: Reverse
Name: prsA [H]
Synonym: A9601_11861
Alternate gene names: 123968719
Gene position: 1001172-1000177 (Counterclockwise)
Preceding gene: 123968721
Following gene: 123968716
Centisome position: 59.95
GC content: 36.14
Gene sequence:
>996_bases GTGACAAGTTTTATCACGGCAATGCAGAGTAAAGAATCGAACTTTAATCTAACTAATAGTAGATTAAGATTAGTAAGTGG GACAACAAACCCAAAGTTAGCTGAAGAAATTGCATCATACTTAGGGATTGAAAATGTACCTTTAATATCTAAAAGATTTG CAGATGGAGAACTTTATGTTCAGATTCAGCAATCTATTAGAGGTTGTGATGTATTCCTTATACAACCTACATGCGCTCCT GTAAACGATAGTTTAATGGAACTAATGATCATGATTGACGCTTGCAAAAGAGCCTCTGCAAGACAAATAACGGCTGTAAT TCCCTATTTTGGATATGCGAGGGCAGATAGGAAAACCTCAGGAAGAGAGTCTATAACTGCAAAATTAACTGCCAATTTAC TAGAGAAATCAGGAGTTGATAGAGTTTTAGCAATGGACTTACACTCAGCTCAAATACAAGGCTACTTCGATATACCATGC GATCATATTTACGGTTCACCTGTATTAATTGATTATCTAGAATCTCTAGATTTAGAAGAAATAGTTGTAGTCTCTCCTGA TGTAGGCGGGGTAGCAAGAGCAAGAGCATTCGCCAAATTAATGAATGATGCGCCTTTGGCTATAATTGATAAAAGGAGAT CTGCGCATAATATCGCTGAAAGTCTAACGGTTATCGGTGAAGTTAAAGGTAAAACTGCTATTCTTATAGACGACATGATA GATACGGGAGGCACAATTTGTTCTGGAGCAAATTTGCTAAAGAAAGAAGGAGCTAATAGGATATTTGCTTGTGCCTCACA TGCTGTATTTTCTCCTCCTTCTTATGAAAGATTAAGTTCTAAGAATCTTTTCGAACAAGTTATTGTGACTAACAGCATAC CAGTTAAACATAAAGATAATTTTCCACAATTAAAAGTTCTTTCTGTCGCAAATATGCTTGGGGAAGCCATTTGGAGAATT CACGAAGAAAGTTCTGTTAGTTCTATGTTTAGATAA
Upstream 100 bases:
>100_bases TTGCTTAATTGATGTGACTTTTGAAAATATCTAGTCATTATCTTTTGCGAAATTCACATAAACGACTACGATGATAATAT AGTTTTATGGTGCAAATTTC
Downstream 100 bases:
>100_bases AAAAATTTATTTTTTACAAACCTTGTAATTTCTTGATTCTCTCAGTTTCAATCTTAAATTGTTTTTCGATCTTTTCAGGA ACATTATCTGGGCACACTTT
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTSFITAMQSKESNFNLTNSRLRLVSGTTNPKLAEEIASYLGIENVPLISKRFADGELYVQIQQSIRGCDVFLIQPTCAP VNDSLMELMIMIDACKRASARQITAVIPYFGYARADRKTSGRESITAKLTANLLEKSGVDRVLAMDLHSAQIQGYFDIPC DHIYGSPVLIDYLESLDLEEIVVVSPDVGGVARARAFAKLMNDAPLAIIDKRRSAHNIAESLTVIGEVKGKTAILIDDMI DTGGTICSGANLLKKEGANRIFACASHAVFSPPSYERLSSKNLFEQVIVTNSIPVKHKDNFPQLKVLSVANMLGEAIWRI HEESSVSSMFR
Sequences:
>Translated_331_residues MTSFITAMQSKESNFNLTNSRLRLVSGTTNPKLAEEIASYLGIENVPLISKRFADGELYVQIQQSIRGCDVFLIQPTCAP VNDSLMELMIMIDACKRASARQITAVIPYFGYARADRKTSGRESITAKLTANLLEKSGVDRVLAMDLHSAQIQGYFDIPC DHIYGSPVLIDYLESLDLEEIVVVSPDVGGVARARAFAKLMNDAPLAIIDKRRSAHNIAESLTVIGEVKGKTAILIDDMI DTGGTICSGANLLKKEGANRIFACASHAVFSPPSYERLSSKNLFEQVIVTNSIPVKHKDNFPQLKVLSVANMLGEAIWRI HEESSVSSMFR >Mature_330_residues TSFITAMQSKESNFNLTNSRLRLVSGTTNPKLAEEIASYLGIENVPLISKRFADGELYVQIQQSIRGCDVFLIQPTCAPV NDSLMELMIMIDACKRASARQITAVIPYFGYARADRKTSGRESITAKLTANLLEKSGVDRVLAMDLHSAQIQGYFDIPCD HIYGSPVLIDYLESLDLEEIVVVSPDVGGVARARAFAKLMNDAPLAIIDKRRSAHNIAESLTVIGEVKGKTAILIDDMID TGGTICSGANLLKKEGANRIFACASHAVFSPPSYERLSSKNLFEQVIVTNSIPVKHKDNFPQLKVLSVANMLGEAIWRIH EESSVSSMFR
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=312, Percent_Identity=41.9871794871795, Blast_Score=267, Evalue=1e-71, Organism=Homo sapiens, GI4506129, Length=310, Percent_Identity=41.9354838709677, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI28557709, Length=312, Percent_Identity=41.9871794871795, Blast_Score=265, Evalue=6e-71, Organism=Homo sapiens, GI84875539, Length=313, Percent_Identity=41.85303514377, Blast_Score=260, Evalue=1e-69, Organism=Homo sapiens, GI4506133, Length=356, Percent_Identity=35.6741573033708, Blast_Score=184, Evalue=8e-47, Organism=Homo sapiens, GI194018537, Length=333, Percent_Identity=33.6336336336336, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI310128524, Length=144, Percent_Identity=28.4722222222222, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI310115209, Length=144, Percent_Identity=28.4722222222222, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI310118259, Length=144, Percent_Identity=28.4722222222222, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI310119946, Length=144, Percent_Identity=28.4722222222222, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI1787458, Length=311, Percent_Identity=49.8392282958199, Blast_Score=327, Evalue=7e-91, Organism=Caenorhabditis elegans, GI17554702, Length=328, Percent_Identity=41.7682926829268, Blast_Score=260, Evalue=8e-70, Organism=Caenorhabditis elegans, GI71989924, Length=328, Percent_Identity=41.7682926829268, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI25149168, Length=312, Percent_Identity=42.3076923076923, Blast_Score=256, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17554704, Length=310, Percent_Identity=42.5806451612903, Blast_Score=254, Evalue=5e-68, Organism=Caenorhabditis elegans, GI17570245, Length=342, Percent_Identity=30.1169590643275, Blast_Score=159, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6319403, Length=328, Percent_Identity=38.4146341463415, Blast_Score=236, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6320946, Length=316, Percent_Identity=40.8227848101266, Blast_Score=234, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6321776, Length=317, Percent_Identity=39.1167192429022, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6322667, Length=197, Percent_Identity=41.6243654822335, Blast_Score=157, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6324511, Length=98, Percent_Identity=37.7551020408163, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI21355239, Length=329, Percent_Identity=41.3373860182371, Blast_Score=269, Evalue=2e-72, Organism=Drosophila melanogaster, GI45551540, Length=352, Percent_Identity=38.6363636363636, Blast_Score=255, Evalue=3e-68, Organism=Drosophila melanogaster, GI24651458, Length=361, Percent_Identity=30.4709141274238, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24651456, Length=361, Percent_Identity=30.4709141274238, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI281362873, Length=361, Percent_Identity=30.4709141274238, Blast_Score=178, Evalue=4e-45, Organism=Drosophila melanogaster, GI24651454, Length=361, Percent_Identity=30.4709141274238, Blast_Score=178, Evalue=4e-45, Organism=Drosophila melanogaster, GI24651462, Length=186, Percent_Identity=37.0967741935484, Blast_Score=127, Evalue=9e-30, Organism=Drosophila melanogaster, GI24651464, Length=186, Percent_Identity=37.0967741935484, Blast_Score=127, Evalue=9e-30, Organism=Drosophila melanogaster, GI45552010, Length=186, Percent_Identity=37.0967741935484, Blast_Score=127, Evalue=9e-30,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 36316; Mature: 36185
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFITAMQSKESNFNLTNSRLRLVSGTTNPKLAEEIASYLGIENVPLISKRFADGELYV CCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHCCCCEEEE QIQQSIRGCDVFLIQPTCAPVNDSLMELMIMIDACKRASARQITAVIPYFGYARADRKTS EEHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHCCCCCC GRESITAKLTANLLEKSGVDRVLAMDLHSAQIQGYFDIPCDHIYGSPVLIDYLESLDLEE CCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCEEECCCHHHHCCCHHHHHHHHHCCCCE IVVVSPDVGGVARARAFAKLMNDAPLAIIDKRRSAHNIAESLTVIGEVKGKTAILIDDMI EEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHEECCCCEEEEEECHH DTGGTICSGANLLKKEGANRIFACASHAVFSPPSYERLSSKNLFEQVIVTNSIPVKHKDN CCCCCEECCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC FPQLKVLSVANMLGEAIWRIHEESSVSSMFR CCCCHHHHHHHHHHHHHHHHHCHHHHHHHCC >Mature Secondary Structure TSFITAMQSKESNFNLTNSRLRLVSGTTNPKLAEEIASYLGIENVPLISKRFADGELYV CHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHCCCCEEEE QIQQSIRGCDVFLIQPTCAPVNDSLMELMIMIDACKRASARQITAVIPYFGYARADRKTS EEHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHCCCCCC GRESITAKLTANLLEKSGVDRVLAMDLHSAQIQGYFDIPCDHIYGSPVLIDYLESLDLEE CCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCEEECCCHHHHCCCHHHHHHHHHCCCCE IVVVSPDVGGVARARAFAKLMNDAPLAIIDKRRSAHNIAESLTVIGEVKGKTAILIDDMI EEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHEECCCCEEEEEECHH DTGGTICSGANLLKKEGANRIFACASHAVFSPPSYERLSSKNLFEQVIVTNSIPVKHKDN CCCCCEECCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC FPQLKVLSVANMLGEAIWRIHEESSVSSMFR CCCCHHHHHHHHHHHHHHHHHCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]