Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968178
Identifier: 123968178
GI number: 123968178
Start: 563677
End: 564120
Strand: Reverse
Name: 123968178
Synonym: A9601_06431
Alternate gene names: NA
Gene position: 564120-563677 (Counterclockwise)
Preceding gene: 123968179
Following gene: 123968177
Centisome position: 33.78
GC content: 31.08
Gene sequence:
>444_bases ATGTCTTTTTTTGAACTATTAGAGAACACACCCAAAATTTTTGGATTCTTTGGAATATTTCTTTTCATTTGCACAATAGC AGCTTTTATATTTGATTTTGGTTTTAAATTTCGAATAATTGGAGCAACTATCTTTTCATTATTGCTTTCTTTGAGTAGTT GGGCATTTATACAAAGTTACTCCGAAAAGGTTGTAATAGAAGGTGCAAAATATGTTCCAATTGTTTATGACAATGGGTTC GATTTGATTATTGCTAAAGCAGATGATGACTTTCCAGAAGAATCTATTGACCCAACTTTAGAACAATTATCGGAAAACTT AAGGAAAGGTAGCAGATCTGGTGCGAATGTAACAATAAAGATAAGAAAACTTGAAAAAATTTCAGATGGCGTAAGTAAAC CAGTGGTTATTGGACAAGTTCAGAAAAATGTCAAAATGAATTAG
Upstream 100 bases:
>100_bases CTTAGTATTTAAATTTAGAGATCTAATTTTTTTCAAGTTAGAGCCCAAAAATAGAGTAGGCTTACAAAATATAAGAAATT AATCAGGTCAAAGCCACTAA
Downstream 100 bases:
>100_bases TCTCTTAAACAATGGAAAGTAAAACCTTTTTAGATATTTTGCCAAATAATTTTAGACATGAGAAATATTTTTTTGTTCAA AATAATCTAATTGACATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSFFELLENTPKIFGFFGIFLFICTIAAFIFDFGFKFRIIGATIFSLLLSLSSWAFIQSYSEKVVIEGAKYVPIVYDNGF DLIIAKADDDFPEESIDPTLEQLSENLRKGSRSGANVTIKIRKLEKISDGVSKPVVIGQVQKNVKMN
Sequences:
>Translated_147_residues MSFFELLENTPKIFGFFGIFLFICTIAAFIFDFGFKFRIIGATIFSLLLSLSSWAFIQSYSEKVVIEGAKYVPIVYDNGF DLIIAKADDDFPEESIDPTLEQLSENLRKGSRSGANVTIKIRKLEKISDGVSKPVVIGQVQKNVKMN >Mature_146_residues SFFELLENTPKIFGFFGIFLFICTIAAFIFDFGFKFRIIGATIFSLLLSLSSWAFIQSYSEKVVIEGAKYVPIVYDNGFD LIIAKADDDFPEESIDPTLEQLSENLRKGSRSGANVTIKIRKLEKISDGVSKPVVIGQVQKNVKMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16505; Mature: 16374
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFELLENTPKIFGFFGIFLFICTIAAFIFDFGFKFRIIGATIFSLLLSLSSWAFIQSY CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHC SEKVVIEGAKYVPIVYDNGFDLIIAKADDDFPEESIDPTLEQLSENLRKGSRSGANVTIK CCEEEECCCEEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE IRKLEKISDGVSKPVVIGQVQKNVKMN EEEHHHHHCCCCCCEEEEEHHCCCCCC >Mature Secondary Structure SFFELLENTPKIFGFFGIFLFICTIAAFIFDFGFKFRIIGATIFSLLLSLSSWAFIQSY CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHC SEKVVIEGAKYVPIVYDNGFDLIIAKADDDFPEESIDPTLEQLSENLRKGSRSGANVTIK CCEEEECCCEEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE IRKLEKISDGVSKPVVIGQVQKNVKMN EEEHHHHHCCCCCCEEEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA