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The map label for this gene is petE [H]

Identifier: 123968172

GI number: 123968172

Start: 556474

End: 556824

Strand: Reverse

Name: petE [H]

Synonym: A9601_06371

Alternate gene names: 123968172

Gene position: 556824-556474 (Counterclockwise)

Preceding gene: 123968173

Following gene: 123968171

Centisome position: 33.35

GC content: 40.46

Gene sequence:

>351_bases
ATGTTACGTTCAATCTTTGCAGGGTTATTTGCAATAGTTTTAACTCTAGGTCTTGGTATTTCATCAGTTTCAGCTAAGAC
TGTTGAAGTAAAACTCGGAACGGATGCTGGAATGCTTGCATTTGAACCAAGTACAGTAACCATTAGTGCTGGTGATACAG
TTAAATTCGTCAATAATAAACTTGCCCCTCACAATGCTGTTTTTGATGGGCATGAGGAATTAAGTCATGCGGACCTAGCT
TTTGCTCCAGGAGAGTCTTGGGGAGAGACATTTGATACTGCTGGAACTTATGATTACTATTGCGAGCCACACAGAGGCGC
TGGAATGGTAGGTAAAGTTATTGTTGAATAA

Upstream 100 bases:

>100_bases
TTTTAAGATTATCAAAGTTACCAAGCTGTAATAACAATTAAAATTCTCGCAGTTAGGTCACCAAAGCCTTGTAATATATA
AAGATAAGCAAATTTTTATT

Downstream 100 bases:

>100_bases
ATCCTCTAAATAGTTAAAACCATTTTTGACTTAATATTTATTACGGTCATATTCAAATTTTGATTGATGAAAATAGTTCC
AAGCGAATTCTCAAATTCTG

Product: plastocyanin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MLRSIFAGLFAIVLTLGLGISSVSAKTVEVKLGTDAGMLAFEPSTVTISAGDTVKFVNNKLAPHNAVFDGHEELSHADLA
FAPGESWGETFDTAGTYDYYCEPHRGAGMVGKVIVE

Sequences:

>Translated_116_residues
MLRSIFAGLFAIVLTLGLGISSVSAKTVEVKLGTDAGMLAFEPSTVTISAGDTVKFVNNKLAPHNAVFDGHEELSHADLA
FAPGESWGETFDTAGTYDYYCEPHRGAGMVGKVIVE
>Mature_116_residues
MLRSIFAGLFAIVLTLGLGISSVSAKTVEVKLGTDAGMLAFEPSTVTISAGDTVKFVNNKLAPHNAVFDGHEELSHADLA
FAPGESWGETFDTAGTYDYYCEPHRGAGMVGKVIVE

Specific function: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I [H]

COG id: COG3794

COG function: function code C; Plastocyanin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 plastocyanin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000923
- InterPro:   IPR001235
- InterPro:   IPR008972
- InterPro:   IPR002387 [H]

Pfam domain/function: PF00127 Copper-bind [H]

EC number: NA

Molecular weight: Translated: 12237; Mature: 12237

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSIFAGLFAIVLTLGLGISSVSAKTVEVKLGTDAGMLAFEPSTVTISAGDTVKFVNNK
CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCEEEEECCCEEEECCCC
LAPHNAVFDGHEELSHADLAFAPGESWGETFDTAGTYDYYCEPHRGAGMVGKVIVE
CCCCCCEECCCHHCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEC
>Mature Secondary Structure
MLRSIFAGLFAIVLTLGLGISSVSAKTVEVKLGTDAGMLAFEPSTVTISAGDTVKFVNNK
CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCEEEEECCCEEEECCCC
LAPHNAVFDGHEELSHADLAFAPGESWGETFDTAGTYDYYCEPHRGAGMVGKVIVE
CCCCCCEECCCHHCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759846; 10320332 [H]