Definition | Prochlorococcus marinus str. AS9601, complete genome. |
---|---|
Accession | NC_008816 |
Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is hisI [H]
Identifier: 123968169
GI number: 123968169
Start: 552585
End: 553244
Strand: Reverse
Name: hisI [H]
Synonym: A9601_06341
Alternate gene names: 123968169
Gene position: 553244-552585 (Counterclockwise)
Preceding gene: 123968171
Following gene: 123968168
Centisome position: 33.13
GC content: 32.42
Gene sequence:
>660_bases ATGACTTATTCAGCTAATTTTTCGATAGAGGATCTACGCTTTGATAATTATGGATTAATCCCTGCAATAGCACAAGATTG GCTTGACGGATCAATTCTTATGCTTGCTTGGATGAACAAAGAATCTTTGACAATGACACTAGAAACCAAAAACGTTCATT ATTGGAGTAGATCAAGATCCGAAATTTGGAGAAAAGGAGCTACAAGTGGAAGTACCCAAATACTGAAGGAGATAAGATTC GACTGCGATAATGATGCACTAATCCTTTTGATTGAACAAAATGGTTCAGGAGCATGTCACACTGGTGAAAAAAGTTGTTT TTTTAACGAAATCAAAATAAATCAAAGTGATAAAAAAGAGAAAAAAACAACTCCCTTCTCAAATATTTGCTCTGAATTAT TCAATACAATTATCGAAAGATCAATAAATCCATCAGAAAAAAGTTACACAAATCATTTATTAACAAAAGGTAGTAATACT ATTTTGAAAAAAATAGGAGAGGAATCTGCAGAGTTTATAATGGCTTGCAAAGATAATGATAAAAAATCAATCTCAAATGA AGCTGCTGATTTGATTTATCATCTGCAAGTTGCCCTTATGCATAAAGGGGTTGAGTGGAGAGATGTACTTGCTATTCTGG AATCAAGAAGAAAAAATTAA
Upstream 100 bases:
>100_bases ACTTTTGCTGCATGAAAATTTCAGAGAATGAATATACATCAATTAACTGTTAGGATAATTTTTAATAAAACACATTGAGT AGGATTACATAACGAACATA
Downstream 100 bases:
>100_bases AAAATTAAAATTTATAATTTTTCATTTTTAATTTTTAATTTTTTTAACCTAAAAGTTTAAAAAATAATGTTGATTAACTA ATTAATAATTATTAATTAAT
Product: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
Products: NA
Alternate protein names: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; Phosphoribosyl-ATP pyrophosphatase; PRA-PH [H]
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTYSANFSIEDLRFDNYGLIPAIAQDWLDGSILMLAWMNKESLTMTLETKNVHYWSRSRSEIWRKGATSGSTQILKEIRF DCDNDALILLIEQNGSGACHTGEKSCFFNEIKINQSDKKEKKTTPFSNICSELFNTIIERSINPSEKSYTNHLLTKGSNT ILKKIGEESAEFIMACKDNDKKSISNEAADLIYHLQVALMHKGVEWRDVLAILESRRKN
Sequences:
>Translated_219_residues MTYSANFSIEDLRFDNYGLIPAIAQDWLDGSILMLAWMNKESLTMTLETKNVHYWSRSRSEIWRKGATSGSTQILKEIRF DCDNDALILLIEQNGSGACHTGEKSCFFNEIKINQSDKKEKKTTPFSNICSELFNTIIERSINPSEKSYTNHLLTKGSNT ILKKIGEESAEFIMACKDNDKKSISNEAADLIYHLQVALMHKGVEWRDVLAILESRRKN >Mature_218_residues TYSANFSIEDLRFDNYGLIPAIAQDWLDGSILMLAWMNKESLTMTLETKNVHYWSRSRSEIWRKGATSGSTQILKEIRFD CDNDALILLIEQNGSGACHTGEKSCFFNEIKINQSDKKEKKTTPFSNICSELFNTIIERSINPSEKSYTNHLLTKGSNTI LKKIGEESAEFIMACKDNDKKSISNEAADLIYHLQVALMHKGVEWRDVLAILESRRKN
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PRA-PH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=201, Percent_Identity=36.318407960199, Blast_Score=125, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6319819, Length=177, Percent_Identity=35.0282485875706, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023019 - InterPro: IPR008179 - InterPro: IPR021130 - InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH; PF01503 PRA-PH [H]
EC number: =3.5.4.19; =3.6.1.31 [H]
Molecular weight: Translated: 24996; Mature: 24864
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSANFSIEDLRFDNYGLIPAIAQDWLDGSILMLAWMNKESLTMTLETKNVHYWSRSRS CEECCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCEEEHHCCHH EIWRKGATSGSTQILKEIRFDCDNDALILLIEQNGSGACHTGEKSCFFNEIKINQSDKKE HHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHH KKTTPFSNICSELFNTIIERSINPSEKSYTNHLLTKGSNTILKKIGEESAEFIMACKDND HCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHEEEEECCCC KKSISNEAADLIYHLQVALMHKGVEWRDVLAILESRRKN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TYSANFSIEDLRFDNYGLIPAIAQDWLDGSILMLAWMNKESLTMTLETKNVHYWSRSRS EECCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCEEEHHCCHH EIWRKGATSGSTQILKEIRFDCDNDALILLIEQNGSGACHTGEKSCFFNEIKINQSDKKE HHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHH KKTTPFSNICSELFNTIIERSINPSEKSYTNHLLTKGSNTILKKIGEESAEFIMACKDND HCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHEEEEECCCC KKSISNEAADLIYHLQVALMHKGVEWRDVLAILESRRKN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]