Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968167
Identifier: 123968167
GI number: 123968167
Start: 551080
End: 551448
Strand: Reverse
Name: 123968167
Synonym: A9601_06321
Alternate gene names: NA
Gene position: 551448-551080 (Counterclockwise)
Preceding gene: 123968168
Following gene: 123968166
Centisome position: 33.02
GC content: 34.42
Gene sequence:
>369_bases ATGAAAGAGAATTACAAAACTCAAGAAAAAATCTATGATGCTGAAGTTTTAGAAAGTTCAACATTTGATGAAAATATCAT TATCAAGATTCTTATTAAAGCGGGAAGAACAATTGCCAAGCCTGCCCTAGAAGTTTTGGAGATGGCACTAGATCCTTATA CTCCTGCACAAGTGAGAGTTTCATTAATGGCTGCTTTAGCATATTTGATTATGCCATTTGATCTTTTCCCTGACTTTATG CCTTTAGTTGGTTTTAGTGATGATTTTGTAGCCCTCACAGCAGTACTCAGTATATGGAGCAAATACATGACTCCTTCAAT AAGAGCAAGAGCAGAGAATAAGCTTAATAAGTTATTTCCTTTTTATTGA
Upstream 100 bases:
>100_bases CGTGCTTTAAGAAAACTTAGAAAAGCAGGTATTCAGAATGGATTAGTTGATAGTATTAGCTAAAAATTCCATTAAAAATA TTTAAATTTCATTTATAAGG
Downstream 100 bases:
>100_bases ATGAGTAAATTATCTATACAGGAAGAAAAAGAACTCGTCTCCTTTATTAAAGATTGGTTAAAAACGCATGGATTTACCCA AAAAGACTTAGCAAATGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKENYKTQEKIYDAEVLESSTFDENIIIKILIKAGRTIAKPALEVLEMALDPYTPAQVRVSLMAALAYLIMPFDLFPDFM PLVGFSDDFVALTAVLSIWSKYMTPSIRARAENKLNKLFPFY
Sequences:
>Translated_122_residues MKENYKTQEKIYDAEVLESSTFDENIIIKILIKAGRTIAKPALEVLEMALDPYTPAQVRVSLMAALAYLIMPFDLFPDFM PLVGFSDDFVALTAVLSIWSKYMTPSIRARAENKLNKLFPFY >Mature_122_residues MKENYKTQEKIYDAEVLESSTFDENIIIKILIKAGRTIAKPALEVLEMALDPYTPAQVRVSLMAALAYLIMPFDLFPDFM PLVGFSDDFVALTAVLSIWSKYMTPSIRARAENKLNKLFPFY
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13919; Mature: 13919
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENYKTQEKIYDAEVLESSTFDENIIIKILIKAGRTIAKPALEVLEMALDPYTPAQVRV CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH SLMAALAYLIMPFDLFPDFMPLVGFSDDFVALTAVLSIWSKYMTPSIRARAENKLNKLFP HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC FY CC >Mature Secondary Structure MKENYKTQEKIYDAEVLESSTFDENIIIKILIKAGRTIAKPALEVLEMALDPYTPAQVRV CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH SLMAALAYLIMPFDLFPDFMPLVGFSDDFVALTAVLSIWSKYMTPSIRARAENKLNKLFP HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC FY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA