Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is gloB [H]
Identifier: 123968150
GI number: 123968150
Start: 536512
End: 537423
Strand: Reverse
Name: gloB [H]
Synonym: A9601_06151
Alternate gene names: 123968150
Gene position: 537423-536512 (Counterclockwise)
Preceding gene: 123968154
Following gene: 123968149
Centisome position: 32.18
GC content: 29.93
Gene sequence:
>912_bases TTGCAATTTGATTCAAAGGTTAATGATCTATTATTTTCTTCCAACGCATTAGAGAAATCTAACCCAGCTTTTTTAAAAGT TGAAATTGAATCTTTTAACAGAGCTCCTTTTGGTAAAGCTATAGTAATCATAGATCAATTTCTTCCAAGGATTCTTCATT CTAATTTAACAATGGAATTTAATAAAGCTCGAAATATAATCGGACTTAGAGTTTTAAGTGATAACGTCATATGGTTGATG GCAAAAGATAAATCCGTTGTAGTTATAGATCCATCTGTACACGAACCAGTTATTAGATATATAAATGAAAACAATTTTCA CTTAGAAGCTATTTTGCAAACTCATCATCATTCAGACCATATTGGAGGGACGAAGTCTCTTATTGAAAAATGGCCAAATG TAAAGGTGATTGCTTCCTCCAAAGAAAAAAAGCGAATCCCTTTTCAAAATGTATCTGTTGAAGATGGAGAAACTTTAAAC ATTTTAGGGGAAGAAGTAAAAATAATTGAAGTATTAGGACATACAAGCTCACATATTGCCTTCTTTTTGAATGGGGAAAA TCCTGTTCTTTTTATTGGTGACACATTGTTTTCTGGAGGATGTGGAAGAATTTTTGAGGGAACTTATCAACAAATGTATT CTTCACTAGAAAGAATCAAATCTTTACCAAAAAATACTCTCATATATTGTGCACATGAATATACAAAGGCAAATATATTG TGGGCATTGAATCTAAAGCCAAAAGATCAAGATATAAAAAATAAACTTTCGGAAGTTGAAAAAAAACTTTCACTTAACGA ATTGACAATTCCATTTTTACTAGATGAAGAGATGAAAATAAACCTTTTCTTAAGAGCAAAAAATTTAGAAGAATTTACTT TTTTAAGAGCAAATAAAGATTTATGGGTTTAA
Upstream 100 bases:
>100_bases TTCTCGTAAAACGTCATACCCAACAATACCCAAATCAGCCTGACCATAACTTACATAAACAGGAACATCTCCATTTCTTA CTAATAGAGCTTTTGCCCGT
Downstream 100 bases:
>100_bases ATAGATAGGTATCTTCCTAAACAAATGTCCTCAAAACAAGTAATTAAAACATCAAATGCTCCAGATCCAGTAGGACCTTA TAATCAAGCAATAAAAGCTG
Product: putative hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MQFDSKVNDLLFSSNALEKSNPAFLKVEIESFNRAPFGKAIVIIDQFLPRILHSNLTMEFNKARNIIGLRVLSDNVIWLM AKDKSVVVIDPSVHEPVIRYINENNFHLEAILQTHHHSDHIGGTKSLIEKWPNVKVIASSKEKKRIPFQNVSVEDGETLN ILGEEVKIIEVLGHTSSHIAFFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKNTLIYCAHEYTKANIL WALNLKPKDQDIKNKLSEVEKKLSLNELTIPFLLDEEMKINLFLRAKNLEEFTFLRANKDLWV
Sequences:
>Translated_303_residues MQFDSKVNDLLFSSNALEKSNPAFLKVEIESFNRAPFGKAIVIIDQFLPRILHSNLTMEFNKARNIIGLRVLSDNVIWLM AKDKSVVVIDPSVHEPVIRYINENNFHLEAILQTHHHSDHIGGTKSLIEKWPNVKVIASSKEKKRIPFQNVSVEDGETLN ILGEEVKIIEVLGHTSSHIAFFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKNTLIYCAHEYTKANIL WALNLKPKDQDIKNKLSEVEKKLSLNELTIPFLLDEEMKINLFLRAKNLEEFTFLRANKDLWV >Mature_303_residues MQFDSKVNDLLFSSNALEKSNPAFLKVEIESFNRAPFGKAIVIIDQFLPRILHSNLTMEFNKARNIIGLRVLSDNVIWLM AKDKSVVVIDPSVHEPVIRYINENNFHLEAILQTHHHSDHIGGTKSLIEKWPNVKVIASSKEKKRIPFQNVSVEDGETLN ILGEEVKIIEVLGHTSSHIAFFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKNTLIYCAHEYTKANIL WALNLKPKDQDIKNKLSEVEKKLSLNELTIPFLLDEEMKINLFLRAKNLEEFTFLRANKDLWV
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538322, Length=264, Percent_Identity=32.5757575757576, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI94538320, Length=226, Percent_Identity=34.5132743362832, Blast_Score=141, Evalue=9e-34, Organism=Homo sapiens, GI14150041, Length=221, Percent_Identity=33.0316742081448, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI116642887, Length=243, Percent_Identity=31.2757201646091, Blast_Score=121, Evalue=6e-28, Organism=Homo sapiens, GI21703352, Length=243, Percent_Identity=31.2757201646091, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI46361987, Length=198, Percent_Identity=31.8181818181818, Blast_Score=116, Evalue=3e-26, Organism=Escherichia coli, GI1786406, Length=253, Percent_Identity=40.3162055335968, Blast_Score=185, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17536925, Length=231, Percent_Identity=32.9004329004329, Blast_Score=137, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17538952, Length=227, Percent_Identity=29.5154185022026, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320478, Length=230, Percent_Identity=33.0434782608696, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6324614, Length=219, Percent_Identity=31.0502283105023, Blast_Score=79, Evalue=8e-16, Organism=Drosophila melanogaster, GI21356335, Length=244, Percent_Identity=34.0163934426229, Blast_Score=144, Evalue=5e-35, Organism=Drosophila melanogaster, GI24667703, Length=244, Percent_Identity=34.0163934426229, Blast_Score=144, Evalue=6e-35, Organism=Drosophila melanogaster, GI24667711, Length=242, Percent_Identity=33.8842975206612, Blast_Score=142, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 34675; Mature: 34675
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFDSKVNDLLFSSNALEKSNPAFLKVEIESFNRAPFGKAIVIIDQFLPRILHSNLTMEF CCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHCCCEEEE NKARNIIGLRVLSDNVIWLMAKDKSVVVIDPSVHEPVIRYINENNFHLEAILQTHHHSDH CCCCCEEEEEEECCCEEEEEECCCEEEEECCCCCHHHHHHHCCCCEEEEEEEECCCCCCC IGGTKSLIEKWPNVKVIASSKEKKRIPFQNVSVEDGETLNILGEEVKIIEVLGHTSSHIA CCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEE FFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKNTLIYCAHEYTKANIL EEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEE WALNLKPKDQDIKNKLSEVEKKLSLNELTIPFLLDEEMKINLFLRAKNLEEFTFLRANKD EEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCCEEEEECCCC LWV CCC >Mature Secondary Structure MQFDSKVNDLLFSSNALEKSNPAFLKVEIESFNRAPFGKAIVIIDQFLPRILHSNLTMEF CCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHCCCEEEE NKARNIIGLRVLSDNVIWLMAKDKSVVVIDPSVHEPVIRYINENNFHLEAILQTHHHSDH CCCCCEEEEEEECCCEEEEEECCCEEEEECCCCCHHHHHHHCCCCEEEEEEEECCCCCCC IGGTKSLIEKWPNVKVIASSKEKKRIPFQNVSVEDGETLNILGEEVKIIEVLGHTSSHIA CCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEE FFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKNTLIYCAHEYTKANIL EEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEE WALNLKPKDQDIKNKLSEVEKKLSLNELTIPFLLDEEMKINLFLRAKNLEEFTFLRANKD EEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCCEEEEECCCC LWV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA