Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968120
Identifier: 123968120
GI number: 123968120
Start: 510614
End: 511519
Strand: Reverse
Name: 123968120
Synonym: A9601_05851
Alternate gene names: NA
Gene position: 511519-510614 (Counterclockwise)
Preceding gene: 123968121
Following gene: 123968119
Centisome position: 30.63
GC content: 32.56
Gene sequence:
>906_bases ATGAACAGTAATAAAAAAATTGAGTCAAGTCTTAAATTAAAAATTTCAGATTGGGAATTAGACTTTTACTCAAGACCAAT TATTGAATCAAATGGAAAAAAAAGGTGGGAATTAATTATTTGCTCTACGAGAAGTTATAAGACAGAAGATGTTTTTCTTT GGAATAAAAAGTGCCCTGCTAATGAAGTTAATTCAGTTTGGCTTACAAAGGCACTAAATGAAGCAATAAGTGAGGCAAAA AAACAAGGGTGGGAGAAACCTTCTATAGTTCGATTCTGGAGGTCGTCAATGAAGTCGATCATTAAGAGATCTCTGGAGGC CGTAAGTATTGAGGCTATTGTAAGCAGAAGAACTTTCAATTTATTAGATAGAATCGAATTTCTTGAAAAAGAGATTTATC CAAAGGAAAAAGGTTATGTAAGAGGTGTACTAGCTCCTACTTTTACTTCTAAAATGGAAAACCCTCCTACACCTCTACCA GAAGCAGTCAGGGGTGATGCTTTAACTATATCTGAAATATCAATTGGCGAATTAAAATCAGCAGAAAATTGGCCCATGGA ATTTGGAGATATTTTCCCAATTCAGCAAAATGTTAATGATAATTACTTAGTTCCAGGATTAAGACTTTTTAGCAAAGATA GATCTTTAGCACTTTCTGCATGGTTTAGTTGTTTAGAACCTATTAAATTAGTCGTAAATAAGAACCAACTCATACTTGAA GCTGCAGAAGATGATAAGTGGCTGGTAACTGATTTACCAGAAAAAGATGCAAACATTTTGAATACAAAGTTTTTGGAGAA TAAAAAAAATTCTTTTGGCTATCAATTTATTTCAATACAGTCAACGCCGTATATCGAAAAATTTGCAGGATTCTGGATCT TAAGAGATATTGAATTAATTTCATAA
Upstream 100 bases:
>100_bases CTGCGGGAGAATTAATTATTGATAAGCAAAAAGTTATGCAAGAAGCCACAGAGAGAGCACTAAAAACTAAAGCACTCTTC GATAAAAAAGAACAAGATAA
Downstream 100 bases:
>100_bases ATTCAGTTTAGGAGCAGGAACTATTCCTTACAAAGAAATATATTTCTCAAAAGATGAAATTTATATTCAAAACAAAAAAT TTGAGTATTATTCATCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNSNKKIESSLKLKISDWELDFYSRPIIESNGKKRWELIICSTRSYKTEDVFLWNKKCPANEVNSVWLTKALNEAISEAK KQGWEKPSIVRFWRSSMKSIIKRSLEAVSIEAIVSRRTFNLLDRIEFLEKEIYPKEKGYVRGVLAPTFTSKMENPPTPLP EAVRGDALTISEISIGELKSAENWPMEFGDIFPIQQNVNDNYLVPGLRLFSKDRSLALSAWFSCLEPIKLVVNKNQLILE AAEDDKWLVTDLPEKDANILNTKFLENKKNSFGYQFISIQSTPYIEKFAGFWILRDIELIS
Sequences:
>Translated_301_residues MNSNKKIESSLKLKISDWELDFYSRPIIESNGKKRWELIICSTRSYKTEDVFLWNKKCPANEVNSVWLTKALNEAISEAK KQGWEKPSIVRFWRSSMKSIIKRSLEAVSIEAIVSRRTFNLLDRIEFLEKEIYPKEKGYVRGVLAPTFTSKMENPPTPLP EAVRGDALTISEISIGELKSAENWPMEFGDIFPIQQNVNDNYLVPGLRLFSKDRSLALSAWFSCLEPIKLVVNKNQLILE AAEDDKWLVTDLPEKDANILNTKFLENKKNSFGYQFISIQSTPYIEKFAGFWILRDIELIS >Mature_301_residues MNSNKKIESSLKLKISDWELDFYSRPIIESNGKKRWELIICSTRSYKTEDVFLWNKKCPANEVNSVWLTKALNEAISEAK KQGWEKPSIVRFWRSSMKSIIKRSLEAVSIEAIVSRRTFNLLDRIEFLEKEIYPKEKGYVRGVLAPTFTSKMENPPTPLP EAVRGDALTISEISIGELKSAENWPMEFGDIFPIQQNVNDNYLVPGLRLFSKDRSLALSAWFSCLEPIKLVVNKNQLILE AAEDDKWLVTDLPEKDANILNTKFLENKKNSFGYQFISIQSTPYIEKFAGFWILRDIELIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34769; Mature: 34769
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNKKIESSLKLKISDWELDFYSRPIIESNGKKRWELIICSTRSYKTEDVFLWNKKCPA CCCCCCCCCEEEEEEEEEEECHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCC NEVNSVWLTKALNEAISEAKKQGWEKPSIVRFWRSSMKSIIKRSLEAVSIEAIVSRRTFN CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDRIEFLEKEIYPKEKGYVRGVLAPTFTSKMENPPTPLPEAVRGDALTISEISIGELKS HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCCCCHHHCCCCEEEECCCHHHCCC AENWPMEFGDIFPIQQNVNDNYLVPGLRLFSKDRSLALSAWFSCLEPIKLVVNKNQLILE CCCCCCCCCCEECHHCCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEE AAEDDKWLVTDLPEKDANILNTKFLENKKNSFGYQFISIQSTPYIEKFAGFWILRDIELI ECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCEEEEEEEC S C >Mature Secondary Structure MNSNKKIESSLKLKISDWELDFYSRPIIESNGKKRWELIICSTRSYKTEDVFLWNKKCPA CCCCCCCCCEEEEEEEEEEECHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCC NEVNSVWLTKALNEAISEAKKQGWEKPSIVRFWRSSMKSIIKRSLEAVSIEAIVSRRTFN CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDRIEFLEKEIYPKEKGYVRGVLAPTFTSKMENPPTPLPEAVRGDALTISEISIGELKS HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCCCCHHHCCCCEEEECCCHHHCCC AENWPMEFGDIFPIQQNVNDNYLVPGLRLFSKDRSLALSAWFSCLEPIKLVVNKNQLILE CCCCCCCCCCEECHHCCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEE AAEDDKWLVTDLPEKDANILNTKFLENKKNSFGYQFISIQSTPYIEKFAGFWILRDIELI ECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCEEEEEEEC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA